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PDBsum entry 6ii2

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Top Page protein Protein-protein interface(s) pores links
Pore analysis for: 6ii2 calculated with MOLE 2.0 PDB id
6ii2
Pores calculated on whole structure Pores calculated excluding ligands

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23 pores, coloured by radius 23 pores, coloured by radius 23 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.43 4.15 32.7 -1.67 -0.56 25.5 81 5 6 4 2 0 1 0  
2 2.43 4.11 36.1 -0.99 -0.46 13.4 82 6 2 5 6 0 3 0  
3 1.96 2.00 39.2 -1.42 -0.48 12.0 84 6 3 4 9 2 3 0  
4 2.59 2.72 39.4 -1.54 -0.60 14.6 83 5 4 7 5 0 3 0  
5 1.90 1.97 47.0 -2.14 -0.46 28.2 83 6 6 3 5 1 1 0  
6 2.60 2.74 48.0 -2.10 -0.61 18.0 83 8 2 8 5 0 3 0  
7 2.00 2.55 49.8 -1.22 -0.59 19.3 91 6 4 8 8 0 3 0  
8 1.41 1.41 50.1 -1.61 -0.45 21.7 80 6 5 4 5 3 1 0  
9 1.90 1.98 53.6 -2.90 -0.56 29.8 80 10 6 6 2 1 1 0  
10 2.00 2.49 56.9 -1.04 -0.38 25.2 88 7 5 5 8 0 2 0  
11 2.41 4.16 63.5 -2.32 -0.61 26.9 85 10 7 8 4 0 2 0  
12 2.00 2.47 72.5 -1.24 -0.47 24.4 88 7 8 9 8 0 2 0  
13 2.00 2.48 80.2 -1.65 -0.51 24.2 89 10 6 10 9 0 3 0  
14 1.32 1.36 94.0 -1.43 -0.37 18.7 87 8 4 12 14 3 3 0  
15 1.84 3.56 99.3 -1.79 -0.66 17.6 86 8 6 12 7 1 5 0  
16 1.84 3.56 103.9 -1.70 -0.52 21.2 81 10 6 9 6 1 4 0  
17 1.84 3.56 107.7 -1.72 -0.56 22.2 85 11 8 12 10 1 4 0  
18 1.61 3.03 119.1 -1.98 -0.56 21.8 87 12 6 13 11 3 3 0  
19 1.84 3.56 119.4 -1.68 -0.55 21.1 83 9 9 14 7 1 4 0  
20 1.84 3.56 123.4 -2.10 -0.64 20.3 85 10 12 13 8 2 3 0  
21 1.84 3.56 127.1 -2.05 -0.58 22.2 84 12 7 15 6 1 5 0  
22 1.37 1.76 147.0 -1.87 -0.58 19.5 87 8 11 19 9 4 6 0  
23 2.72 3.10 154.4 -2.14 -0.69 20.4 87 11 13 17 7 1 7 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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