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PDBsum entry 6ieb

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Top Page protein Protein-protein interface(s) pores links
Pore analysis for: 6ieb calculated with MOLE 2.0 PDB id
6ieb
Pores calculated on whole structure Pores calculated excluding ligands

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19 pores, coloured by radius 19 pores, coloured by radius 19 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.80 1.86 29.8 -0.92 -0.43 10.1 80 1 1 1 2 0 4 0  
2 2.96 3.05 33.2 -1.16 -0.57 16.5 89 3 1 3 5 0 1 0  
3 3.06 3.06 34.4 -1.31 -0.64 12.3 82 2 1 1 0 0 4 0  
4 1.41 1.41 36.1 -1.41 -0.27 18.8 76 3 2 1 2 1 2 0  
5 1.14 2.07 40.3 -0.67 -0.34 15.2 87 4 1 2 5 0 1 0  
6 3.10 3.10 41.3 -1.30 -0.45 16.8 87 3 1 3 1 0 2 0  
7 3.44 3.88 41.6 -0.92 -0.54 12.1 88 4 1 2 4 0 1 0  
8 1.80 1.86 51.3 -1.11 -0.48 12.3 79 3 1 1 2 0 5 0  
9 3.08 3.08 55.4 -1.67 -0.63 17.4 90 6 2 3 1 0 2 0  
10 1.56 2.82 58.5 -1.61 -0.51 16.5 87 4 3 6 2 0 3 0  
11 3.45 4.03 60.0 -1.94 -0.69 21.6 91 7 5 7 3 0 2 0  
12 1.85 2.70 61.1 -1.78 -0.55 19.7 91 6 5 6 3 1 2 0  
13 2.96 3.07 63.5 -1.69 -0.57 20.1 87 7 4 8 3 0 3 0  
14 1.37 1.60 68.8 -1.19 -0.25 11.8 79 3 3 6 6 5 1 0  
15 1.85 2.67 73.0 -1.48 -0.50 15.5 87 6 2 5 2 1 4 0  
16 1.38 1.60 74.1 -1.33 -0.26 12.8 84 3 3 7 5 4 1 0  
17 2.29 3.70 75.7 -1.24 -0.63 13.9 90 7 4 9 3 0 3 0  
18 1.20 1.51 116.2 -1.30 -0.35 13.2 86 7 5 12 6 4 4 0  
19 1.20 1.50 125.1 -1.37 -0.34 14.7 85 8 6 13 7 4 4 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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