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PDBsum entry 6hw8
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Top Page protein ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 6hw8 calculated with MOLE 2.0 PDB id
6hw8
Tunnels calculated on whole structure Tunnels calculated excluding ligands
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32 tunnels, coloured by tunnel radius 32 tunnels, coloured by tunnel radius 32 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.38 1.50 77.8 -0.66 -0.19 14.0 83 7 3 6 8 6 1 2  GT8 301 V MES 303 V
2 1.35 1.49 107.2 -0.92 -0.30 11.1 85 6 3 11 7 8 0 0  GT8 301 K MG 303 K MES 304 K GT8 301 V MES 303 V
3 1.37 1.50 116.2 -1.04 -0.27 13.5 83 7 6 10 9 8 0 0  GT8 301 V MES 303 V
4 1.36 1.49 118.2 -1.00 -0.23 14.5 83 7 6 10 9 8 0 0  GT8 301 V MES 303 V
5 1.35 1.46 125.6 -1.17 -0.34 11.0 84 7 4 13 7 10 0 0  GT8 301 V MES 303 V GT8 301 Y MG 303 Y MES 304 Y
6 1.35 1.47 139.2 -2.08 -0.33 23.6 83 13 6 10 7 7 1 0  GT8 301 V MES 303 V
7 1.36 1.52 140.8 -1.80 -0.29 20.4 82 10 4 12 7 10 0 0  GT8 301 V MES 303 V
8 1.37 1.56 144.4 -1.54 -0.24 18.3 81 12 5 12 9 11 0 1  GT8 301 V MES 303 V
9 1.29 1.49 145.5 -1.95 -0.27 21.8 84 12 3 14 5 10 0 0  GT8 301 V MES 303 V
10 1.36 1.51 147.3 -2.11 -0.37 21.7 83 14 5 11 7 7 1 0  GT8 301 V MES 303 V
11 1.37 1.55 149.0 -2.06 -0.31 24.5 82 16 6 12 5 11 1 0  GT8 301 V MES 303 V
12 1.37 1.55 149.2 -2.02 -0.34 22.1 81 15 6 10 5 10 0 0  GT8 301 V MES 303 V
13 1.36 1.52 151.3 -1.90 -0.35 20.8 85 12 7 13 6 7 0 0  GT8 301 V MES 303 V
14 1.38 1.54 151.5 -1.88 -0.28 20.6 82 13 6 14 9 8 1 0  GT8 301 V MES 303 V
15 1.37 1.55 153.1 -1.76 -0.27 20.4 83 13 8 13 7 11 0 0  GT8 301 V MES 303 V
16 1.38 1.55 156.1 -1.70 -0.31 17.8 82 14 5 14 9 10 1 1  GT8 301 V MES 303 V
17 1.37 1.55 154.2 -1.84 -0.35 19.3 83 11 4 13 7 10 0 0  GT8 301 V MES 303 V
18 1.34 1.51 157.1 -1.26 -0.19 16.9 80 14 4 12 11 9 1 0  GT8 301 V MES 303 V
19 1.37 1.54 157.8 -1.50 -0.15 18.5 78 11 6 11 10 11 3 0  GT8 301 V MES 303 V
20 1.28 1.42 161.0 -1.97 -0.34 20.0 84 13 5 16 5 10 0 0  GT8 301 V MES 303 V
21 1.38 1.52 161.6 -2.03 -0.34 22.8 83 17 6 13 5 10 0 0  GT8 301 V MES 303 V
22 1.38 1.52 162.5 -2.08 -0.39 21.3 82 15 6 11 5 10 0 0  GT8 301 V MES 303 V
23 1.39 1.50 164.6 -1.95 -0.32 19.6 82 14 6 15 9 9 1 0  GT8 301 V MES 303 V
24 1.37 1.56 164.3 -1.89 -0.38 19.2 86 14 7 14 6 7 0 0  GT8 301 V MES 303 V
25 1.38 1.52 164.5 -1.72 -0.26 19.5 83 16 6 12 8 9 1 0  GT8 301 V MES 303 V
26 1.37 1.56 166.5 -1.75 -0.26 19.7 84 13 6 15 7 11 0 0  GT8 301 V MES 303 V
27 1.23 1.21 165.5 -1.34 -0.25 15.9 82 13 3 14 9 10 1 0  GT8 301 V MES 303 V
28 1.32 1.36 171.4 -1.36 -0.25 16.0 81 15 4 13 11 9 1 0  GT8 301 V MES 303 V
29 1.14 1.97 23.2 -0.64 -0.08 2.9 74 0 1 2 1 2 2 0  
30 1.14 2.00 27.0 -0.74 -0.26 3.6 82 1 0 3 1 1 2 0  
31 1.97 2.13 15.3 1.65 0.38 6.9 73 1 0 0 4 0 1 0  
32 1.39 1.51 16.3 1.31 0.25 7.5 73 1 0 0 4 0 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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