 |
PDBsum entry 6hvy
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
|
|
|
|
|
|
|
|
|
|
Tunnel analysis for: 6hvy calculated with MOLE 2.0
|
PDB id
|
|
|
|
6hvy
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
Tunnels calculated on whole structure |
 |
Tunnels calculated excluding ligands
|
|
|
 |
 |
 |
 |
 |
|
 |
|
|
|
 |
 |
|
 |
|
|
|
 |
61 tunnels,
coloured by tunnel radius |
 |
31 tunnels,
coloured by
tunnel radius
|
31 tunnels,
coloured as in list below
|
|
|
 |
 |
 |
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
|
|
 |
|
|
|
 |
Free R
|
 |
|
|
|
|
 |
Length
|
 |
|
|
|
|
 |
HPathy
|
 |
|
|
|
|
 |
HPhob
|
 |
|
|
|
|
 |
Polar
|
 |
|
|
|
|
 |
Rel Mut
|
 |
|
|
|
|
 |
Residue..type
|
 |
|
|
|
|
 |
Ligands
|
 |
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.33 |
1.49 |
72.9 |
-0.43 |
-0.07 |
12.3 |
82 |
 |
6 |
2 |
5 |
9 |
6 |
1 |
2 |
 |
GVZ 301 H MES 303 H
|
 |
 |
2 |
 |
1.30 |
1.47 |
121.2 |
-1.15 |
-0.28 |
15.8 |
83 |
8 |
5 |
10 |
10 |
8 |
0 |
0 |
GVZ 301 H MES 303 H
|
 |
3 |
 |
1.30 |
1.47 |
121.1 |
-1.20 |
-0.31 |
15.0 |
83 |
8 |
5 |
10 |
10 |
8 |
0 |
0 |
GVZ 301 H MES 303 H
|
 |
4 |
 |
1.29 |
1.47 |
135.3 |
-2.02 |
-0.32 |
23.4 |
82 |
13 |
4 |
10 |
9 |
7 |
1 |
0 |
GVZ 301 H MES 303 H
|
 |
5 |
 |
1.22 |
1.20 |
140.9 |
-1.05 |
-0.26 |
10.2 |
80 |
9 |
4 |
16 |
9 |
14 |
0 |
0 |
GVZ 301 H MES 303 H
|
 |
6 |
 |
1.32 |
1.50 |
140.6 |
-1.42 |
-0.23 |
16.9 |
81 |
13 |
4 |
13 |
10 |
10 |
1 |
1 |
GVZ 301 H MES 303 H
|
 |
7 |
 |
1.19 |
1.16 |
144.1 |
-1.06 |
-0.28 |
10.1 |
81 |
9 |
4 |
17 |
9 |
13 |
0 |
0 |
GVZ 301 H MES 303 H
|
 |
8 |
 |
1.31 |
1.50 |
144.9 |
-1.71 |
-0.27 |
19.1 |
82 |
12 |
3 |
12 |
9 |
9 |
0 |
0 |
GVZ 301 H MES 303 H
|
 |
9 |
 |
1.30 |
1.48 |
144.8 |
-1.90 |
-0.33 |
20.4 |
84 |
12 |
3 |
14 |
7 |
9 |
0 |
0 |
GVZ 301 H MES 303 H
|
 |
10 |
 |
1.32 |
1.49 |
147.1 |
-1.73 |
-0.27 |
20.9 |
83 |
13 |
8 |
13 |
10 |
8 |
0 |
0 |
GVZ 301 H MES 303 H
|
 |
11 |
 |
1.32 |
1.51 |
150.5 |
-1.81 |
-0.35 |
19.0 |
84 |
12 |
6 |
14 |
7 |
8 |
0 |
0 |
GVZ 301 H MES 303 H
|
 |
12 |
 |
1.32 |
1.51 |
149.1 |
-2.00 |
-0.33 |
23.7 |
84 |
17 |
5 |
12 |
8 |
9 |
0 |
0 |
GVZ 301 H MES 303 H
|
 |
13 |
 |
1.20 |
1.19 |
150.2 |
-1.14 |
-0.23 |
14.9 |
82 |
12 |
2 |
14 |
10 |
9 |
1 |
0 |
GVZ 301 H MES 303 H
|
 |
14 |
 |
1.32 |
1.51 |
150.3 |
-2.01 |
-0.39 |
21.2 |
83 |
14 |
4 |
11 |
8 |
7 |
1 |
0 |
GVZ 301 H MES 303 H
|
 |
15 |
 |
1.32 |
1.51 |
151.0 |
-1.96 |
-0.35 |
21.1 |
81 |
16 |
6 |
10 |
6 |
10 |
0 |
0 |
GVZ 301 H MES 303 H
|
 |
16 |
 |
1.35 |
1.46 |
155.8 |
-1.46 |
-0.29 |
15.8 |
82 |
13 |
4 |
14 |
10 |
10 |
1 |
1 |
GVZ 301 H MES 303 H
|
 |
17 |
 |
1.34 |
1.46 |
157.9 |
-1.50 |
-0.30 |
19.7 |
83 |
13 |
7 |
13 |
11 |
9 |
0 |
0 |
GVZ 301 H MES 303 H
|
 |
18 |
 |
1.31 |
1.47 |
156.4 |
-1.70 |
-0.34 |
17.6 |
83 |
12 |
3 |
14 |
9 |
10 |
0 |
0 |
GVZ 301 H MES 303 H
|
 |
19 |
 |
1.28 |
1.32 |
159.4 |
-1.24 |
-0.21 |
15.8 |
80 |
14 |
4 |
13 |
11 |
9 |
1 |
0 |
GVZ 301 H MES 303 H
|
 |
20 |
 |
1.30 |
1.50 |
160.4 |
-1.65 |
-0.25 |
21.2 |
82 |
15 |
5 |
12 |
10 |
10 |
0 |
0 |
GVZ 301 H MES 303 H
|
 |
21 |
 |
1.31 |
1.50 |
159.6 |
-1.88 |
-0.40 |
18.3 |
85 |
13 |
3 |
15 |
7 |
8 |
0 |
0 |
GVZ 301 H MES 303 H
|
 |
22 |
 |
1.34 |
1.45 |
162.7 |
-1.74 |
-0.35 |
19.2 |
83 |
14 |
8 |
14 |
10 |
8 |
0 |
0 |
GVZ 301 H MES 303 H
|
 |
23 |
 |
1.34 |
1.49 |
164.5 |
-1.96 |
-0.40 |
21.3 |
84 |
18 |
5 |
13 |
8 |
9 |
0 |
0 |
GVZ 301 H MES 303 H
|
 |
24 |
 |
1.28 |
1.27 |
164.6 |
-1.22 |
-0.31 |
13.8 |
83 |
13 |
2 |
15 |
10 |
9 |
1 |
0 |
GVZ 301 H MES 303 H
|
 |
25 |
 |
1.34 |
1.48 |
166.1 |
-1.97 |
-0.40 |
19.6 |
82 |
17 |
6 |
12 |
6 |
10 |
0 |
0 |
GVZ 301 H MES 303 H
|
 |
26 |
 |
1.33 |
1.48 |
168.1 |
-1.77 |
-0.39 |
19.4 |
81 |
15 |
7 |
12 |
6 |
9 |
0 |
0 |
GVZ 301 H MES 303 H
|
 |
27 |
 |
1.18 |
1.30 |
169.3 |
-1.61 |
-0.42 |
17.6 |
83 |
13 |
4 |
13 |
8 |
8 |
0 |
0 |
GVZ 301 H MES 303 H
|
 |
28 |
 |
1.34 |
1.41 |
173.0 |
-1.49 |
-0.34 |
17.6 |
83 |
14 |
7 |
14 |
11 |
10 |
0 |
0 |
GVZ 301 H MES 303 H
|
 |
29 |
 |
1.33 |
1.47 |
175.6 |
-1.71 |
-0.33 |
20.3 |
83 |
16 |
6 |
13 |
10 |
10 |
0 |
0 |
GVZ 301 H MES 303 H
|
 |
30 |
 |
1.29 |
1.50 |
175.3 |
-1.27 |
-0.28 |
14.8 |
81 |
15 |
4 |
14 |
11 |
9 |
1 |
0 |
GVZ 301 H MES 303 H
|
 |
31 |
 |
1.55 |
1.60 |
15.9 |
-2.46 |
-0.32 |
36.0 |
78 |
3 |
4 |
0 |
1 |
2 |
0 |
0 |
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
Residue-type_colouring |
 |
|
 |
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
 |