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PDBsum entry 6huq

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Pore analysis for: 6huq calculated with MOLE 2.0 PDB id
6huq
Pores calculated on whole structure Pores calculated excluding ligands

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30 pores, coloured by radius 30 pores, coloured by radius 30 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.68 1.86 25.2 -1.40 -0.35 22.3 79 4 5 0 2 2 0 0  
2 1.50 1.72 83.9 -1.97 -0.36 26.4 82 13 6 4 4 5 0 0  
3 1.58 1.77 91.4 -1.71 -0.30 20.9 80 11 4 5 5 7 0 0  
4 1.98 2.18 104.7 -2.45 -0.42 27.5 77 14 10 5 2 7 1 0  
5 1.90 2.04 108.1 -2.42 -0.40 28.0 78 16 7 7 3 8 1 0  
6 1.62 2.17 111.0 -1.94 -0.28 23.3 79 13 7 8 6 7 1 1  
7 1.58 2.69 111.3 -2.08 -0.31 22.1 78 14 6 8 5 7 1 0  
8 1.49 1.74 115.0 -1.71 -0.32 20.6 80 15 5 7 7 8 0 1  
9 1.29 1.32 117.8 -1.21 -0.33 18.8 84 14 7 8 10 5 0 0  
10 1.30 1.33 133.1 -1.57 -0.36 22.0 80 14 9 9 9 7 1 0  
11 1.28 1.26 133.7 -1.64 -0.33 20.2 83 13 8 11 11 6 0 0  
12 1.37 2.74 162.8 -1.76 -0.52 14.8 88 16 4 13 6 7 0 0  SO4 201 b
13 1.36 1.73 165.9 -1.36 -0.30 20.2 82 13 11 8 14 7 0 0  GT5 301 K
14 1.73 2.47 163.9 -1.89 -0.50 16.1 85 15 5 15 5 8 1 0  SO4 201 b
15 1.54 1.78 168.6 -2.07 -0.39 24.9 81 21 7 6 7 5 2 0  
16 1.80 1.95 175.5 -2.28 -0.39 26.2 77 20 7 7 5 8 3 0  
17 1.32 1.68 194.5 -1.61 -0.50 15.6 87 16 8 17 11 7 0 0  GT5 301 K SO4 201 b
18 2.16 2.36 206.5 -2.32 -0.46 22.5 80 19 10 12 4 11 1 0  
19 1.81 2.86 217.6 -2.36 -0.43 23.5 79 19 10 15 6 9 2 0  
20 1.33 1.50 218.0 -1.65 -0.34 19.2 82 17 9 16 14 10 0 1  GT5 301 K
21 1.18 1.23 217.4 -1.63 -0.30 17.2 79 16 4 15 10 14 2 0  
22 1.47 3.27 223.4 -1.78 -0.36 19.9 81 17 9 15 12 11 1 0  GT5 301 K
23 1.68 1.83 229.8 -2.16 -0.39 21.8 83 24 6 17 9 10 2 0  
24 1.34 1.50 228.1 -1.98 -0.44 22.4 82 20 13 13 10 10 0 0  GT5 301 K
25 1.55 2.54 229.6 -2.18 -0.41 21.1 81 21 8 16 7 9 1 0  
26 1.19 1.17 250.0 -1.63 -0.36 19.9 85 18 12 19 19 8 0 0  GT5 301 K
27 1.28 1.28 248.1 -1.40 -0.32 16.7 81 17 7 17 16 14 1 0  GT5 301 K
28 1.60 3.45 248.3 -2.00 -0.41 21.8 82 20 13 17 12 8 1 0  GT5 301 K
29 1.54 2.51 260.3 -1.87 -0.42 19.9 83 22 11 18 13 9 0 0  GT5 301 K
30 1.63 3.45 260.5 -1.89 -0.39 21.0 84 25 9 19 15 9 1 0  GT5 301 K

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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