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PDBsum entry 6hu9

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Pore analysis for: 6hu9 calculated with MOLE 2.0 PDB id
6hu9
Pores calculated on whole structure Pores calculated excluding ligands

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27 pores, coloured by radius 31 pores, coloured by radius 31 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.28 1.54 121.6 -2.16 -0.41 26.9 81 22 6 7 5 2 4 0  PEF 604 N
2 2.19 2.73 121.9 -2.02 -0.51 20.6 84 13 6 14 4 2 3 1  PEF 604 N
3 3.36 5.05 135.9 -2.42 -0.44 27.2 83 14 8 8 4 3 3 0  PCF 604 H
4 1.21 1.96 142.3 -2.27 -0.48 24.9 82 12 10 9 6 4 2 0  
5 2.85 4.61 143.9 0.10 0.28 11.4 74 9 4 5 21 13 3 1  PCF 606 N CDL 402 O CDL 302 P CDL 601 S
6 1.36 1.63 153.4 -1.85 -0.46 22.7 84 19 10 14 8 0 4 1  
7 2.20 2.68 162.0 -2.14 -0.59 21.5 84 17 9 16 6 2 3 0  
8 1.26 1.30 170.4 -1.00 -0.14 15.2 82 10 7 9 13 9 2 0  CDL 302 P PEF 607 m PEF 301 o
9 1.33 1.79 169.9 -2.29 -0.42 27.9 77 24 11 7 9 2 8 0  
10 2.53 2.62 179.2 -0.59 -0.07 15.4 78 15 13 9 24 9 7 0  PCF 607 C HEC 401 D CDL 601 H PEF 603 H HEC 401 O
11 1.51 2.11 179.5 -0.83 -0.22 15.3 85 12 7 9 12 5 4 0  
12 1.22 2.03 193.3 -2.15 -0.59 21.7 84 16 12 19 8 3 1 0  
13 2.16 3.10 195.4 0.53 0.18 9.0 85 10 7 14 34 8 4 0  PEF 501 A UQ6 603 C CDL 604 C PEF 605 C PEF 606 C
PEF 402 D PEF 303 E PCF 101 I CDL 501 L PEF 604 N
PEF 605 N
14 1.23 1.94 194.6 -0.56 -0.08 15.3 82 15 11 16 27 7 4 0  PEF 501 A CDL 604 C PEF 605 C PEF 606 C PEF 402 D
PEF 303 E PCF 101 I
15 1.29 1.83 192.7 -1.99 -0.41 25.5 78 22 13 8 9 5 4 0  CDL 302 P
16 2.46 4.44 198.2 -0.96 -0.27 17.4 81 16 16 9 18 4 10 0  HEC 401 D HEC 401 O
17 1.55 4.20 199.5 -1.38 -0.23 22.4 81 20 6 4 9 5 2 0  PCF 604 H PEF 606 a PEF 201 e
18 2.29 2.44 205.0 -1.89 -0.45 21.4 82 19 15 17 10 5 3 1  CDL 302 P
19 1.16 1.85 226.3 -2.38 -0.48 27.0 78 25 15 12 9 3 5 0  
20 2.55 2.97 234.1 -1.40 -0.18 21.1 82 19 11 10 19 9 3 0  PCF 604 H PEF 607 a PEF 201 e PCF 202 e
21 2.96 5.55 247.2 -2.52 -0.51 25.5 82 23 14 16 7 5 6 0  PEF 604 N
22 1.25 2.03 251.1 -2.11 -0.49 24.5 83 25 14 14 10 3 6 0  
23 1.22 1.90 260.9 -0.65 -0.09 15.8 79 18 16 13 30 13 10 0  HEC 401 D HEC 401 O PEF 607 a PEF 201 e PCF 202 e
24 2.25 2.77 260.4 -1.99 -0.54 20.3 86 20 15 25 10 3 5 0  
25 2.23 2.80 263.5 -2.04 -0.52 21.2 86 22 16 23 10 3 5 1  
26 2.24 2.94 279.6 -1.28 -0.26 18.4 82 25 15 25 25 7 8 1  PEF 501 A CDL 604 C PEF 605 C PEF 606 C PEF 402 D
PEF 303 E PCF 101 I
27 1.25 2.11 293.4 -2.17 -0.44 24.7 81 29 18 17 11 3 9 0  
28 2.60 2.85 330.3 -2.28 -0.47 24.6 81 29 22 19 12 8 6 0  CDL 302 P
29 1.31 1.37 393.1 -1.13 -0.21 16.7 81 27 20 29 27 13 6 3  PCF 603 S PEF 303 n PEF 304 n PEF 201 q
30 1.24 1.23 418.1 -0.69 -0.07 15.3 80 25 17 21 38 17 12 1  HEC 401 D HEC 401 O PEF 303 n PEF 304 n PEF 201 q
PCF 202 q
31 1.29 1.28 45.6 1.81 0.60 4.3 86 1 1 2 12 1 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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