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PDBsum entry 6hkj

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Tunnel analysis for: 6hkj calculated with MOLE 2.0 PDB id
6hkj
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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4 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.19 1.21 46.9 -1.23 -0.25 15.1 76 4 6 4 5 5 0 0  TAM 817 A G8W 818 A
2 1.25 1.25 56.7 -1.49 -0.23 15.9 73 4 6 5 4 7 1 0  NAG 806 A G8W 818 A
3 1.65 2.43 16.6 0.73 0.17 9.3 78 1 1 1 6 2 0 0  
4 1.20 1.36 17.7 -0.97 -0.62 4.0 99 1 0 6 2 0 1 0  
5 1.22 1.38 19.4 -0.95 -0.64 3.9 104 1 0 6 2 0 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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