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PDBsum entry 6hec

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Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 6hec calculated with MOLE 2.0 PDB id
6hec
Pores calculated on whole structure Pores calculated excluding ligands

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30 pores, coloured by radius 30 pores, coloured by radius 30 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.80 3.15 25.6 -0.65 -0.47 19.2 90 2 4 2 2 1 0 0  
2 2.98 3.08 45.7 -2.72 -0.66 30.0 78 6 6 4 1 1 3 0  
3 1.47 1.66 59.3 -1.45 -0.16 26.6 79 5 8 1 8 2 2 0  
4 1.36 1.52 64.9 -2.38 -0.53 28.4 79 10 6 3 4 0 5 0  ATP 401 I
5 3.28 3.99 69.9 -3.04 -0.65 33.2 79 8 9 4 1 0 6 0  
6 1.37 1.55 81.5 -2.13 -0.47 24.2 80 10 8 3 4 0 6 0  ATP 401 I MG 402 I
7 1.15 3.12 116.6 -0.22 -0.17 9.6 87 6 4 12 14 1 2 0  
8 1.77 2.51 141.1 -1.83 -0.50 29.5 81 17 15 4 9 2 2 0  
9 1.17 1.59 154.4 -1.31 -0.35 18.3 84 11 7 6 12 2 6 0  
10 1.57 4.00 157.5 -1.13 -0.27 22.5 83 11 17 4 17 2 3 0  
11 1.16 1.64 170.3 -1.23 -0.30 17.6 85 17 5 5 15 1 5 0  ATP 401 I
12 1.35 1.92 184.9 -1.29 -0.33 19.5 78 13 15 6 17 5 5 0  ATP 401 L
13 1.48 1.56 185.0 -1.04 0.10 11.7 75 13 7 8 20 13 6 0  
14 1.25 3.22 195.7 -0.90 -0.23 14.0 79 10 13 12 16 6 6 0  
15 1.65 1.83 198.3 -1.36 -0.37 18.6 83 17 11 12 18 3 4 0  
16 1.75 1.87 198.7 -1.46 -0.41 18.8 81 12 12 12 17 3 6 0  
17 1.60 1.83 201.8 -1.82 -0.44 25.0 79 23 23 4 16 3 4 0  ATP 401 L
18 1.36 1.82 204.7 -1.24 -0.35 15.7 81 12 14 15 16 6 4 0  
19 1.58 3.34 205.1 -1.82 -0.49 28.7 77 14 22 2 11 2 7 0  
20 1.25 1.25 207.8 -1.28 -0.34 19.3 80 16 16 7 16 6 6 0  
21 1.26 1.23 216.2 -1.57 -0.36 19.1 79 19 15 12 14 6 11 0  ADP 401 J MG 402 J
22 1.25 1.25 215.7 -0.96 -0.31 14.4 82 13 17 11 20 6 8 0  
23 1.46 2.23 276.2 -2.02 -0.45 27.6 82 29 29 9 14 3 5 0  
24 1.64 1.84 279.4 -1.57 -0.34 25.8 80 29 30 3 23 5 4 0  ATP 401 L
25 1.64 1.84 287.3 -1.32 -0.31 21.9 82 26 30 7 28 5 6 0  ATP 401 L
26 1.71 1.94 287.9 -1.74 -0.35 24.7 80 32 29 8 22 5 9 0  ADP 401 J MG 402 J ATP 401 L
27 1.53 2.64 405.6 -2.23 -0.45 28.8 81 45 40 13 15 7 10 0  
28 1.26 1.25 395.8 -1.36 -0.04 17.1 76 27 24 12 22 21 11 0  
29 1.36 2.63 410.2 -1.54 -0.31 21.0 81 31 28 16 22 10 10 0  
30 1.36 2.27 418.2 -1.43 -0.27 19.0 79 26 31 19 22 14 9 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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