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PDBsum entry 6he9

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Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 6he9 calculated with MOLE 2.0 PDB id
6he9
Pores calculated on whole structure Pores calculated excluding ligands

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30 pores, coloured by radius 30 pores, coloured by radius 30 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 5.91 5.95 43.3 -2.29 -0.50 27.1 81 4 5 3 2 1 3 0  
2 4.98 6.02 50.5 -1.75 -0.24 26.9 77 5 12 1 5 1 4 0  
3 1.80 2.61 56.4 -1.79 -0.41 22.7 76 2 8 1 5 1 7 0  
4 1.62 3.58 61.1 -1.53 -0.16 31.6 79 6 8 0 7 0 2 0  
5 5.08 5.32 62.3 -1.90 -0.26 30.4 79 11 9 2 6 1 2 0  
6 5.00 6.02 67.6 -2.00 -0.36 28.1 78 8 12 1 6 2 6 0  
7 5.65 7.52 74.7 -2.04 -0.33 27.1 80 12 9 6 3 4 2 0  
8 1.22 1.88 76.0 -1.32 -0.34 25.1 88 8 10 4 5 2 0 0  
9 1.80 2.60 75.3 -1.63 -0.36 19.1 84 4 5 3 6 1 4 0  
10 4.99 5.94 77.3 -2.19 -0.42 23.9 77 8 11 5 2 5 7 0  
11 2.18 5.26 86.4 -1.75 -0.31 21.6 84 14 4 7 5 2 1 0  
12 1.61 2.68 89.3 -1.02 -0.22 23.3 77 10 10 2 8 3 1 0  
13 1.52 1.67 100.9 -0.52 -0.17 9.8 87 7 4 8 9 0 2 0  
14 1.66 1.66 111.3 -1.88 -0.49 22.6 77 8 9 3 7 3 8 0  ADP 401 L MG 402 L
15 1.65 2.44 111.5 -0.97 -0.24 12.2 79 6 4 7 12 1 6 0  
16 1.63 3.61 133.1 -0.45 -0.06 10.4 79 7 4 8 16 4 5 0  
17 1.53 1.52 138.6 -0.04 0.01 8.3 81 6 5 11 18 5 5 0  
18 1.56 3.57 139.8 -0.15 -0.01 10.3 78 5 5 9 18 6 3 0  
19 1.34 1.51 148.2 -1.73 -0.49 23.7 77 18 13 3 5 3 5 0  
20 1.60 1.60 151.9 -1.86 -0.47 22.7 78 8 13 4 12 4 9 0  ADP 401 L MG 402 L
21 1.61 1.60 161.6 -1.69 -0.33 20.2 80 14 13 7 12 7 7 0  ADP 401 L MG 402 L
22 1.76 2.65 168.0 -1.07 -0.16 11.2 76 8 3 6 13 10 5 0  
23 2.45 3.43 165.6 -1.13 -0.10 10.9 75 10 3 5 11 10 7 0  
24 1.54 1.58 169.7 -0.82 -0.08 9.1 78 9 4 7 12 9 6 0  
25 1.49 1.51 183.6 -1.02 -0.37 15.0 87 12 12 14 12 1 3 0  
26 1.53 2.49 194.3 -1.25 -0.39 15.9 83 11 12 13 15 2 7 0  
27 1.58 3.68 189.2 -0.58 0.01 9.9 74 9 3 7 17 15 6 0  
28 1.61 3.87 215.9 -0.85 -0.23 14.5 82 12 12 14 19 5 6 0  
29 1.63 1.60 248.4 -1.23 -0.23 13.3 79 15 11 11 14 11 8 0  
30 1.50 2.49 341.1 -1.24 -0.23 15.7 77 21 19 11 23 15 11 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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