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PDBsum entry 6h39

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Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 6h39 calculated with MOLE 2.0 PDB id
6h39
Pores calculated on whole structure Pores calculated excluding ligands

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30 pores, coloured by radius 30 pores, coloured by radius 30 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.63 2.40 108.0 -1.89 -0.36 23.2 78 15 8 7 6 9 1 1  
2 1.94 2.05 108.8 -2.39 -0.40 27.8 79 16 8 6 3 6 0 0  
3 1.91 1.99 112.9 -2.21 -0.42 25.2 80 13 7 8 5 8 0 0  
4 1.09 2.07 117.3 -2.37 -0.42 27.0 81 16 7 10 4 8 1 0  
5 1.37 1.36 128.6 -1.57 -0.29 20.6 78 17 7 7 9 7 1 0  
6 1.74 1.91 134.7 -1.18 -0.40 16.4 86 8 6 11 11 3 3 2  FGY 801 K MES 804 K
7 1.16 1.82 140.9 -1.62 -0.20 19.9 76 15 7 7 8 9 3 0  
8 1.60 2.37 144.8 -1.39 -0.40 16.1 85 11 5 12 11 5 1 1  FGY 801 K MES 804 K
9 1.78 1.94 143.5 -1.70 -0.49 18.0 86 9 4 12 9 6 0 0  FGY 801 K MES 804 K
10 1.79 1.94 150.2 -1.91 -0.52 19.9 84 15 6 9 7 6 0 0  FGY 801 K MES 804 K
11 1.30 1.23 153.5 -2.13 -0.33 22.9 81 15 11 13 8 8 2 0  
12 1.20 1.71 151.5 -1.10 -0.34 15.2 85 12 4 11 13 4 1 0  FGY 801 K MES 804 K
13 1.73 1.89 155.6 -1.36 -0.36 16.7 84 13 9 12 10 7 1 0  FGY 801 K MES 804 K
14 1.58 2.32 157.3 -1.33 -0.40 15.5 86 13 6 14 12 5 2 1  FGY 801 K MES 804 K
15 1.25 1.39 159.1 -1.11 -0.34 14.6 83 13 4 11 13 5 1 0  FGY 801 K MES 804 K
16 1.72 2.00 161.1 -2.30 -0.52 26.5 82 17 15 9 5 6 0 0  
17 1.87 1.89 165.9 -1.85 -0.54 21.9 89 18 8 13 9 4 0 0  FGY 801 K MES 804 K
18 1.33 1.33 168.1 -1.69 -0.48 18.7 89 13 8 17 14 4 0 0  FGY 801 K MES 804 K
19 1.10 1.98 170.5 -1.90 -0.48 20.4 85 16 5 14 7 7 1 0  FGY 801 K MES 804 K
20 1.89 1.96 188.5 -1.90 -0.39 22.4 83 16 9 13 7 7 3 2  
21 1.77 2.06 191.7 -1.87 -0.56 20.8 87 13 12 13 10 4 0 0  FGY 801 K MES 804 K
22 1.26 1.26 206.9 -1.82 -0.46 19.9 83 15 12 15 7 7 4 0  
23 1.72 2.04 212.7 -1.65 -0.43 19.4 84 17 10 14 10 7 1 0  FGY 801 K MES 804 K
24 1.30 1.71 212.5 -1.88 -0.40 20.6 84 16 8 16 11 8 2 0  FGY 801 K MES 804 K
25 1.58 1.58 212.2 -1.80 -0.35 21.1 82 20 7 13 9 8 1 0  
26 1.59 2.59 218.0 -1.97 -0.39 20.8 83 21 9 16 8 9 2 1  
27 1.80 1.96 216.4 -2.00 -0.34 22.3 82 21 12 14 7 11 1 0  
28 1.81 2.08 226.7 -2.42 -0.49 26.3 85 26 11 15 5 8 0 0  
29 1.25 1.23 228.8 -2.24 -0.45 23.6 85 21 11 19 10 8 0 0  
30 1.29 1.77 273.2 -2.36 -0.39 24.4 82 24 11 19 7 12 2 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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