PDBsum entry 6gnu Go to PDB code:  Tunnel analysis for: 6gnu calculated with MOLE 2.0 PDB id 6gnu Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   3 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.16 1.45 31.4 0.69 0.39 2.8 72 0 1 1 8 7 0 0  F5Z 502 A 2 1.16 1.44 39.9 0.86 0.39 3.8 76 1 2 2 11 6 0 0  MYA 501 A F5Z 502 A 3 1.17 1.45 59.0 0.43 0.40 3.9 77 1 1 5 14 9 1 0  MYA 501 A F5Z 502 A 4 1.27 2.69 27.1 -0.42 0.30 10.0 73 1 2 1 4 3 2 0   5 1.29 2.69 27.8 -0.57 0.27 10.1 75 1 2 1 3 3 2 0   6 1.28 2.69 27.9 -0.49 0.28 9.6 75 1 2 1 3 3 2 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.