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PDBsum entry 6giq

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Pore analysis for: 6giq calculated with MOLE 2.0 PDB id
6giq
Pores calculated on whole structure Pores calculated excluding ligands

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30 pores, coloured by radius 30 pores, coloured by radius 30 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.25 1.75 84.3 -0.17 0.03 16.5 79 8 10 2 14 3 4 1  HEC 401 D
2 2.16 4.33 109.6 -1.37 -0.47 21.4 79 8 14 5 9 2 5 0  HEC 401 D
3 2.21 4.37 135.2 -1.17 -0.26 21.3 81 12 14 7 13 3 7 0  HEC 401 D HEC 401 O
4 1.17 1.88 138.3 -1.65 -0.32 17.0 81 14 5 13 7 7 4 0  9PE 401 N
5 1.26 1.59 146.9 -0.49 -0.12 18.0 79 11 15 4 21 3 6 1  HEC 401 D HEC 401 O
6 1.25 1.85 153.2 -0.81 -0.12 21.1 79 13 14 5 21 4 6 1  HEC 401 D HEC 401 O
7 1.15 1.86 165.6 -1.43 -0.29 14.6 83 15 6 21 14 8 4 0  
8 2.10 5.28 167.6 -0.82 -0.08 13.5 78 15 6 11 15 10 3 1  8PE 404 C
9 1.22 1.25 181.0 -0.59 0.03 14.2 77 12 6 11 22 10 0 0  8PE 404 C UNK 34 m UNK 35 m
10 1.27 1.50 195.1 -0.68 -0.01 15.7 78 16 8 10 26 10 3 1  8PE 404 C HEC 401 D
11 1.23 1.93 221.7 -0.25 -0.04 16.3 80 16 14 8 35 9 4 1  6PH 401 C HEC 401 D 7PH 402 D PCF 101 I
12 1.93 5.43 216.5 -1.32 -0.30 18.7 78 16 12 13 19 9 4 0  8PE 404 C HEC 401 D
13 2.30 5.09 222.4 -0.63 0.01 11.2 76 13 4 15 23 12 2 0  8PE 404 C
14 1.73 1.73 229.5 -0.42 -0.09 12.8 82 16 9 10 23 9 8 1  UNK 27 m UNK 30 m UNK 31 m UNK 32 m UNK 34 m UNK
35 m
15 1.22 1.19 237.6 -1.43 -0.20 18.9 83 20 9 21 20 9 2 0  8PE 406 N CN3 408 N
16 2.11 5.00 242.1 -1.21 -0.19 18.9 80 20 12 15 23 10 6 0  8PE 404 C HEC 401 D HEC 401 O
17 2.00 4.85 244.4 -0.63 0.02 13.6 76 17 8 16 25 14 2 0  8PE 404 C
18 2.17 4.51 248.8 -0.47 0.16 15.1 78 21 8 10 31 14 7 0  CN5 405 C 9PE 401 N 6PH 402 N UQ6 405 N 9PE 407 N
19 1.23 1.23 242.6 -0.05 0.17 11.7 80 19 5 13 40 12 10 0  6PH 401 C CN5 405 C UQ6 406 C 9PE 401 N
20 1.19 1.62 258.5 -1.05 -0.33 19.1 82 17 15 10 14 3 7 1  UNK 35 m
21 1.21 1.94 256.1 -1.95 -0.42 19.6 83 20 9 28 17 8 3 0  8PE 404 C
22 2.14 4.48 267.0 -0.45 -0.09 11.2 80 13 11 13 24 11 7 1  UNK 34 m UNK 35 m
23 1.24 1.23 276.9 -0.42 0.14 13.0 80 22 7 18 39 15 7 0  CN5 405 C 6PH 402 N UQ6 405 N 9PE 407 N
24 1.23 1.22 277.6 -0.42 0.14 13.1 81 22 7 19 38 15 7 0  CN5 405 C 6PH 402 N UQ6 405 N 9PE 407 N
25 1.89 2.40 289.0 -0.52 -0.06 13.4 80 17 15 14 27 13 7 1  UNK 34 m UNK 35 m
26 1.27 1.27 305.0 -1.58 -0.37 17.2 83 21 12 31 20 7 6 1  
27 2.07 5.04 309.7 -2.24 -0.42 23.4 80 31 13 27 15 9 6 1  8PE 404 C 9PE 401 N
28 1.26 1.25 326.5 -1.48 -0.32 18.6 83 24 16 30 22 8 6 1  
29 1.24 1.24 326.9 -1.89 -0.38 19.8 82 30 12 33 22 10 5 1  8PE 404 C
30 1.21 2.24 351.3 -1.54 -0.32 18.2 82 28 18 34 27 13 4 1  UNK 34 m UNK 35 m

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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