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PDBsum entry 6giq

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Top Page protein ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 6giq calculated with MOLE 2.0 PDB id
6giq
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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5 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.40 1.74 23.1 1.44 0.34 1.4 88 0 0 1 9 1 0 0  
2 1.35 1.35 24.4 1.20 0.20 1.5 89 0 0 1 9 1 0 0  
3 1.30 1.33 24.7 0.56 0.24 7.2 82 1 0 2 6 1 1 0  
4 1.47 1.69 15.6 -0.08 -0.14 10.3 86 2 0 0 3 0 0 0  
5 1.47 1.69 15.6 -0.08 -0.14 10.3 86 2 0 0 3 0 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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