 |
PDBsum entry 6gg6
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
|
|
|
|
|
|
|
|
|
|
Pore analysis for: 6gg6 calculated with MOLE 2.0
|
PDB id
|
|
|
|
6gg6
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
Pores calculated on whole structure |
 |
Pores calculated excluding ligands
|
|
|
 |
 |
 |
 |
 |
|
 |
|
|
|
 |
 |
|
 |
|
|
|
 |
18 pores,
coloured by radius |
 |
30 pores,
coloured by radius
|
30 pores,
coloured as in list below
|
|
|
 |
 |
 |
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
|
|
 |
|
|
|
 |
Free R
|
 |
|
|
|
|
 |
Length
|
 |
|
|
|
|
 |
HPathy
|
 |
|
|
|
|
 |
HPhob
|
 |
|
|
|
|
 |
Polar
|
 |
|
|
|
|
 |
Rel Mut
|
 |
|
|
|
|
 |
Residue..type
|
 |
|
|
|
|
 |
Ligands
|
 |
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.39 |
1.39 |
27.1 |
-1.37 |
-0.52 |
18.3 |
92 |
 |
4 |
1 |
3 |
1 |
1 |
0 |
0 |
 |
CSO 474 F PO4 604 F
|
 |
 |
2 |
 |
1.58 |
1.59 |
57.8 |
-2.54 |
-0.71 |
27.0 |
90 |
6 |
4 |
4 |
1 |
0 |
1 |
0 |
PO4 604 H
|
 |
3 |
 |
1.42 |
2.08 |
59.4 |
-2.81 |
-0.68 |
37.7 |
83 |
7 |
10 |
0 |
2 |
0 |
1 |
0 |
|
 |
4 |
 |
2.22 |
2.58 |
70.9 |
-2.08 |
-0.56 |
21.9 |
85 |
6 |
5 |
5 |
4 |
0 |
1 |
0 |
|
 |
5 |
 |
1.35 |
1.51 |
93.3 |
-2.62 |
-0.66 |
34.9 |
83 |
9 |
13 |
2 |
3 |
0 |
1 |
0 |
|
 |
6 |
 |
2.82 |
2.97 |
108.8 |
-2.09 |
-0.55 |
28.0 |
82 |
8 |
9 |
2 |
4 |
0 |
2 |
0 |
|
 |
7 |
 |
2.32 |
3.24 |
33.7 |
-3.23 |
-0.76 |
29.6 |
89 |
3 |
3 |
5 |
0 |
0 |
1 |
0 |
|
 |
8 |
 |
1.39 |
1.39 |
46.3 |
-1.70 |
-0.60 |
15.8 |
91 |
6 |
1 |
7 |
1 |
1 |
0 |
0 |
CSO 474 A PO4 604 A
|
 |
9 |
 |
1.33 |
1.43 |
94.6 |
-2.73 |
-0.65 |
35.8 |
84 |
8 |
12 |
2 |
3 |
0 |
1 |
0 |
|
 |
10 |
 |
1.37 |
1.47 |
103.4 |
-2.51 |
-0.65 |
30.4 |
85 |
9 |
11 |
5 |
4 |
0 |
1 |
0 |
|
 |
11 |
 |
1.63 |
1.80 |
148.2 |
-2.12 |
-0.59 |
25.7 |
86 |
12 |
9 |
7 |
5 |
0 |
2 |
0 |
|
 |
12 |
 |
2.40 |
2.40 |
25.4 |
-2.54 |
-0.60 |
27.6 |
81 |
3 |
2 |
1 |
0 |
1 |
0 |
0 |
|
 |
13 |
 |
1.20 |
1.41 |
30.0 |
-2.20 |
-0.36 |
30.2 |
76 |
8 |
4 |
1 |
3 |
1 |
1 |
0 |
|
 |
14 |
 |
1.02 |
2.08 |
48.3 |
-2.47 |
-0.30 |
32.2 |
74 |
10 |
2 |
1 |
2 |
3 |
1 |
0 |
|
 |
15 |
 |
2.40 |
2.40 |
53.3 |
-2.74 |
-0.61 |
34.9 |
82 |
8 |
4 |
2 |
2 |
1 |
0 |
0 |
|
 |
16 |
 |
1.22 |
1.43 |
54.5 |
-2.21 |
-0.35 |
30.1 |
78 |
9 |
6 |
2 |
4 |
2 |
2 |
0 |
|
 |
17 |
 |
2.42 |
2.43 |
68.5 |
-2.19 |
-0.50 |
28.5 |
82 |
10 |
6 |
3 |
1 |
2 |
1 |
0 |
|
 |
18 |
 |
1.57 |
1.63 |
71.1 |
-2.17 |
-0.32 |
29.9 |
77 |
14 |
4 |
1 |
3 |
2 |
1 |
0 |
|
 |
19 |
 |
2.68 |
2.89 |
83.8 |
-2.32 |
-0.43 |
31.6 |
79 |
12 |
7 |
3 |
3 |
2 |
2 |
0 |
|
 |
20 |
 |
2.67 |
2.88 |
91.3 |
-2.36 |
-0.37 |
33.8 |
81 |
14 |
6 |
4 |
4 |
2 |
2 |
0 |
|
 |
21 |
 |
3.41 |
5.58 |
32.1 |
-2.49 |
-0.63 |
33.4 |
75 |
6 |
4 |
1 |
1 |
1 |
0 |
0 |
|
 |
22 |
 |
1.72 |
1.72 |
34.9 |
-1.79 |
-0.51 |
25.6 |
85 |
5 |
4 |
3 |
1 |
1 |
0 |
0 |
|
 |
23 |
 |
1.22 |
1.39 |
42.2 |
-2.94 |
-0.63 |
35.5 |
82 |
9 |
6 |
3 |
2 |
0 |
1 |
0 |
|
 |
24 |
 |
1.66 |
1.69 |
65.2 |
-2.08 |
-0.58 |
28.7 |
85 |
12 |
10 |
5 |
2 |
1 |
0 |
0 |
|
 |
25 |
 |
1.12 |
2.04 |
75.1 |
-2.65 |
-0.46 |
34.5 |
76 |
11 |
6 |
3 |
4 |
2 |
1 |
0 |
|
 |
26 |
 |
1.20 |
2.57 |
80.5 |
-1.96 |
-0.49 |
27.1 |
82 |
11 |
8 |
5 |
6 |
2 |
1 |
0 |
MG 602 D
|
 |
27 |
 |
1.66 |
1.68 |
119.3 |
-2.08 |
-0.47 |
27.1 |
81 |
14 |
11 |
5 |
4 |
3 |
2 |
0 |
|
 |
28 |
 |
2.01 |
2.03 |
138.9 |
-2.43 |
-0.37 |
30.8 |
79 |
18 |
7 |
4 |
4 |
4 |
1 |
0 |
|
 |
29 |
 |
1.77 |
1.76 |
99.8 |
-2.25 |
-0.56 |
30.5 |
81 |
13 |
11 |
5 |
4 |
2 |
1 |
0 |
|
 |
30 |
 |
1.86 |
1.88 |
112.2 |
-2.12 |
-0.46 |
29.6 |
81 |
16 |
11 |
5 |
5 |
2 |
1 |
0 |
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
Residue-type_colouring |
 |
|
 |
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
 |