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PDBsum entry 6gg6

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Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 6gg6 calculated with MOLE 2.0 PDB id
6gg6
Pores calculated on whole structure Pores calculated excluding ligands

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18 pores, coloured by radius 30 pores, coloured by radius 30 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.39 1.39 27.1 -1.37 -0.52 18.3 92 4 1 3 1 1 0 0  CSO 474 F PO4 604 F
2 1.58 1.59 57.8 -2.54 -0.71 27.0 90 6 4 4 1 0 1 0  PO4 604 H
3 1.42 2.08 59.4 -2.81 -0.68 37.7 83 7 10 0 2 0 1 0  
4 2.22 2.58 70.9 -2.08 -0.56 21.9 85 6 5 5 4 0 1 0  
5 1.35 1.51 93.3 -2.62 -0.66 34.9 83 9 13 2 3 0 1 0  
6 2.82 2.97 108.8 -2.09 -0.55 28.0 82 8 9 2 4 0 2 0  
7 2.32 3.24 33.7 -3.23 -0.76 29.6 89 3 3 5 0 0 1 0  
8 1.39 1.39 46.3 -1.70 -0.60 15.8 91 6 1 7 1 1 0 0  CSO 474 A PO4 604 A
9 1.33 1.43 94.6 -2.73 -0.65 35.8 84 8 12 2 3 0 1 0  
10 1.37 1.47 103.4 -2.51 -0.65 30.4 85 9 11 5 4 0 1 0  
11 1.63 1.80 148.2 -2.12 -0.59 25.7 86 12 9 7 5 0 2 0  
12 2.40 2.40 25.4 -2.54 -0.60 27.6 81 3 2 1 0 1 0 0  
13 1.20 1.41 30.0 -2.20 -0.36 30.2 76 8 4 1 3 1 1 0  
14 1.02 2.08 48.3 -2.47 -0.30 32.2 74 10 2 1 2 3 1 0  
15 2.40 2.40 53.3 -2.74 -0.61 34.9 82 8 4 2 2 1 0 0  
16 1.22 1.43 54.5 -2.21 -0.35 30.1 78 9 6 2 4 2 2 0  
17 2.42 2.43 68.5 -2.19 -0.50 28.5 82 10 6 3 1 2 1 0  
18 1.57 1.63 71.1 -2.17 -0.32 29.9 77 14 4 1 3 2 1 0  
19 2.68 2.89 83.8 -2.32 -0.43 31.6 79 12 7 3 3 2 2 0  
20 2.67 2.88 91.3 -2.36 -0.37 33.8 81 14 6 4 4 2 2 0  
21 3.41 5.58 32.1 -2.49 -0.63 33.4 75 6 4 1 1 1 0 0  
22 1.72 1.72 34.9 -1.79 -0.51 25.6 85 5 4 3 1 1 0 0  
23 1.22 1.39 42.2 -2.94 -0.63 35.5 82 9 6 3 2 0 1 0  
24 1.66 1.69 65.2 -2.08 -0.58 28.7 85 12 10 5 2 1 0 0  
25 1.12 2.04 75.1 -2.65 -0.46 34.5 76 11 6 3 4 2 1 0  
26 1.20 2.57 80.5 -1.96 -0.49 27.1 82 11 8 5 6 2 1 0  MG 602 D
27 1.66 1.68 119.3 -2.08 -0.47 27.1 81 14 11 5 4 3 2 0  
28 2.01 2.03 138.9 -2.43 -0.37 30.8 79 18 7 4 4 4 1 0  
29 1.77 1.76 99.8 -2.25 -0.56 30.5 81 13 11 5 4 2 1 0  
30 1.86 1.88 112.2 -2.12 -0.46 29.6 81 16 11 5 5 2 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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