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PDBsum entry 6gcc

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Top Page protein ligands Protein-protein interface(s) tunnels links
Tunnel analysis for: 6gcc calculated with MOLE 2.0 PDB id
6gcc
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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4 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.27 1.40 20.2 -1.11 -0.33 11.8 81 3 2 1 3 1 2 0  
2 1.26 1.39 26.8 -0.74 -0.28 10.9 81 3 2 2 3 1 3 0  
3 1.19 1.97 29.3 -0.96 -0.36 9.1 86 3 0 3 1 1 1 0  
4 1.17 1.16 31.9 -0.71 -0.28 6.5 85 4 0 4 1 2 1 0  TUG 2 C

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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