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PDBsum entry 6fii

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Top Page protein ligands metals Protein-protein interface(s) links
Cell cycle PDB id
6fii
Contents
Protein chains
438 a.a.
424 a.a.
123 a.a.
349 a.a.
Ligands
GTP ×2
GDP ×2
MES
GOL ×2
DMS
SG9
ACP
Metals
_MG ×5
_CA ×3
Waters ×559

References listed in PDB file
Key reference
Title A fluorescence anisotropy assay to discover and characterize ligands targeting the maytansine site of tubulin.
Authors G.Menchon, A.E.Prota, D.Lucena-Agell, P.Bucher, R.Jansen, H.Irschik, R.Müller, I.Paterson, J.F.Díaz, K.H.Altmann, M.O.Steinmetz.
Ref. Nat Commun, 2018, 9, 2106.
PubMed id 29844393
Abstract
Microtubule-targeting agents (MTAs) like taxol and vinblastine are among the most successful chemotherapeutic drugs against cancer. Here, we describe a fluorescence anisotropy-based assay that specifically probes for ligands targeting the recently discovered maytansine site of tubulin. Using this assay, we have determined the dissociation constants of known maytansine site ligands, including the pharmacologically active degradation product of the clinical antibody-drug conjugate trastuzumab emtansine. In addition, we discovered that the two natural products spongistatin-1 and disorazole Z with established cellular potency bind to the maytansine site on β-tubulin. The high-resolution crystal structures of spongistatin-1 and disorazole Z in complex with tubulin allowed the definition of an additional sub-site adjacent to the pocket shared by all maytansine-site ligands, which could be exploitable as a distinct, separate target site for small molecules. Our study provides a basis for the discovery and development of next-generation MTAs for the treatment of cancer.
PROCHECK
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