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PDBsum entry 6f9f

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Top Page protein Protein-protein interface(s) pores links
Pore analysis for: 6f9f calculated with MOLE 2.0 PDB id
6f9f
Pores calculated on whole structure Pores calculated excluding ligands

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23 pores, coloured by radius 23 pores, coloured by radius 23 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.17 3.00 54.3 -1.40 -0.33 16.4 83 4 3 8 4 2 1 0  
2 1.63 1.81 68.3 -1.05 -0.54 16.4 90 5 4 10 6 2 1 1  
3 2.67 4.09 81.7 -1.53 -0.42 19.6 80 8 5 7 5 2 1 0  
4 1.28 1.29 98.3 -1.27 -0.48 18.6 85 7 6 8 10 2 4 2  
5 1.55 1.58 103.4 -1.14 -0.51 18.3 81 6 7 7 11 2 1 0  
6 1.53 1.71 117.1 -1.31 -0.31 18.0 81 7 6 7 10 3 3 0  
7 1.72 1.85 125.7 -1.19 -0.36 17.5 84 7 8 10 8 2 5 0  
8 1.60 1.60 126.9 -1.28 -0.22 13.8 83 8 4 9 4 4 3 0  
9 1.80 1.80 136.4 -1.15 -0.22 18.2 84 7 5 9 6 2 3 0  
10 1.52 1.71 148.0 -1.43 -0.38 18.0 80 9 10 17 11 5 4 0  
11 1.58 1.78 170.0 -1.47 -0.31 19.1 84 7 8 12 12 3 5 0  
12 1.71 1.85 168.9 -1.28 -0.39 16.4 83 7 8 10 9 2 6 0  
13 1.23 1.23 206.9 -1.41 -0.47 19.5 86 14 10 13 14 3 6 2  
14 1.62 1.73 214.8 -1.77 -0.47 23.0 83 13 10 9 5 2 5 0  
15 1.31 1.35 244.1 -1.35 -0.40 17.3 84 11 12 16 18 5 8 2  
16 1.30 1.56 236.9 -1.60 -0.46 17.3 81 7 6 8 8 2 5 0  
17 1.74 1.72 249.5 -1.86 -0.41 21.0 79 12 12 9 7 4 7 0  
18 1.52 1.71 266.4 -1.55 -0.41 18.8 83 11 14 17 16 4 7 0  
19 1.33 1.62 252.8 -1.27 -0.48 17.2 84 7 8 9 8 1 4 0  
20 1.35 1.36 281.8 -1.26 -0.49 17.1 85 17 13 22 16 3 6 2  
21 1.61 1.58 295.1 -1.56 -0.39 17.4 85 15 11 18 11 4 7 0  
22 1.07 1.31 333.5 -1.82 -0.51 21.4 80 12 12 8 6 3 5 0  
23 1.53 1.67 373.6 -1.77 -0.46 21.6 83 18 17 17 15 4 7 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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