PDBsum entry 6epd Go to PDB code:  Pore analysis for: 6epd calculated with MOLE 2.0 PDB id 6epd Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   24 pores, coloured by radius 24 pores, coloured by radius 24 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.40 2.65 43.2 -1.42 -0.42 19.3 83 5 3 5 5 2 0 0   2 1.58 1.90 76.1 -1.91 -0.46 23.4 87 8 6 7 7 1 0 0   3 2.72 5.66 88.2 -2.36 -0.39 27.8 74 8 14 4 4 5 3 0   4 2.67 4.75 93.3 -1.56 -0.34 20.8 79 8 12 7 10 4 7 0   5 1.25 1.29 122.3 -1.54 -0.39 20.1 80 12 12 6 12 4 7 1   6 1.38 2.07 151.5 -1.98 -0.36 22.9 81 20 7 10 6 5 2 0   7 2.24 2.25 152.0 -1.34 -0.24 16.6 81 14 12 18 13 7 5 0   8 1.44 1.44 161.9 -1.36 -0.41 18.2 79 13 16 8 14 5 8 0   9 1.26 1.62 194.9 -1.93 -0.37 25.3 83 18 17 15 14 3 2 0   10 1.19 1.34 198.6 -1.16 -0.28 17.6 80 16 13 7 12 3 6 1   11 1.19 1.74 205.7 -1.08 -0.15 17.4 82 18 15 15 24 7 5 0   12 1.28 2.04 233.6 -1.61 -0.32 19.6 79 16 24 18 17 11 10 0   13 1.33 1.35 246.6 -0.75 -0.15 14.6 81 19 15 13 25 7 12 0   14 1.28 1.31 278.6 -1.33 -0.36 18.5 82 26 21 15 20 6 8 0   15 1.19 2.21 300.8 -1.49 -0.34 18.8 82 31 28 21 25 10 10 0   16 1.26 0.96 353.4 -1.24 -0.31 17.7 82 24 28 22 27 9 13 0   17 1.17 2.81 445.0 -0.68 -0.11 15.1 79 20 26 18 30 15 8 1   18 1.35 1.34 480.8 -0.59 -0.05 15.7 79 28 24 19 39 14 12 1   19 1.26 1.27 496.1 -1.39 -0.26 17.8 80 30 24 26 35 19 7 1   20 1.31 1.18 568.0 -1.00 -0.20 17.9 79 30 36 27 38 17 13 1   21 1.20 1.74 73.6 -0.33 0.03 15.9 75 6 3 2 8 2 3 1   22 1.13 1.45 30.1 0.25 0.09 6.6 77 2 0 2 7 3 1 0   23 1.17 1.77 44.3 1.43 0.48 6.3 69 2 0 2 11 3 0 1   24 2.10 2.34 36.7 0.40 0.33 7.3 67 2 0 1 2 2 0 1   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.