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PDBsum entry 6e4x

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Top Page protein ligands Protein-protein interface(s) links
Viral protein/immune system PDB id
6e4x
Contents
Protein chains
275 a.a.
208 a.a.
231 a.a.
Ligands
NAG-NAG-BMA-MAN-
FUC
NAG-NAG-BMA
NAG-NAG-BMA-FUC
NAG
GOL ×4
Waters ×144

References listed in PDB file
Key reference
Title Antibodies to a conserved influenza head interface epitope protect by an igg subtype-Dependent mechanism.
Authors A.Watanabe, K.R.Mccarthy, M.Kuraoka, A.G.Schmidt, Y.Adachi, T.Onodera, K.Tonouchi, T.M.Caradonna, G.Bajic, S.Song, C.E.Mcgee, G.D.Sempowski, F.Feng, P.Urick, T.B.Kepler, Y.Takahashi, S.C.Harrison, G.Kelsoe.
Ref. Cell, 2019, 177, 1124. [DOI no: 10.1016/j.cell.2019.03.048]
PubMed id 31100267
Abstract
Vaccines to generate durable humoral immunity against antigenically evolving pathogens such as the influenza virus must elicit antibodies that recognize conserved epitopes. Analysis of single memory B cells from immunized human donors has led us to characterize a previously unrecognized epitope of influenza hemagglutinin (HA) that is immunogenic in humans and conserved among influenza subtypes. Structures show that an unrelated antibody from a participant in an experimental infection protocol recognized the epitope as well. IgGs specific for this antigenic determinant do not block viral infection in vitro, but passive administration to mice affords robust IgG subtype-dependent protection against influenza infection. The epitope, occluded in the pre-fusion form of HA, is at the contact surface between HA head domains; reversible molecular "breathing" of the HA trimer can expose the interface to antibody and B cells. Antigens that present this broadly immunogenic HA epitope may be good candidates for inclusion in "universal" flu vaccines.
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