PDBsum entry 6dwh

Hydrolase

PDB id: 6dwh

Contents

Protein chains

(+ 0 more) 223 a.a.

(+ 0 more) 163 a.a.

Metals

_NA ×8

_CL ×2

Waters ×810

References listed in PDB file

Key reference

• Title: Crystal structures of the complex of a kallikrein inhibitor from bauhinia bauhinioides with trypsin and modeling of kallikrein complexes.
• Authors: M.Li, J.Srp, A.Gustchina, Z.Dauter, M.Mares, A.Wlodawer.
• Ref.: Acta Crystallogr D Struct Biol, 2019, 75, 56-69. [DOI no: 10.1107/S2059798318016492]
• PubMed id: 30644845

Abstract

Structures of a recombinant Kunitz-type serine protease inhibitor from Bauhinia bauhinioides (BbKI) complexed with bovine trypsin were determined in two crystal forms. The crystal structure with the L55R mutant of BbKI was determined in space group P6₄ at 1.94 Å resolution and that with native BbKI in the monoclinic space group P2₁ at 3.95 Å resolution. The asymmetric unit of the latter crystals contained 44 independent complexes, thus representing one of the largest numbers of independent objects deposited in the Protein Data Bank. Additionally, the structure of the complex with native BbKI was determined at 2.0 Å resolution from P6₄ crystals isomorphous to those of the mutant. Since BbKI has previously been found to be a potent inhibitor of the trypsin-like plasma kallikrein, it was also tested against several tissue kallikreins. It was found that BbKI is a potent inhibitor of human tissue kallikrein 4 (KLK4) and the chymotrypsin-like human tissue kallikrein 7 (KLK7). Structures of BbKI complexed with the catalytic domain of human plasma kallikrein were modeled, as well as those with KLK4 and KLK7, and the structures were analyzed in order to identify the interactions that are responsible for inhibitory potency.