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PDBsum entry 6dv0

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Top Page protein ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 6dv0 calculated with MOLE 2.0 PDB id
6dv0
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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0 tunnels, coloured by tunnel radius 7 tunnels, coloured by tunnel radius 7 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.59 2.42 15.6 0.85 0.34 10.6 88 1 1 0 6 1 1 0  GA8 201 B
2 1.64 2.56 16.9 0.81 0.11 9.1 92 1 1 0 6 0 1 0  GA8 201 B
3 2.43 2.43 17.6 0.39 -0.05 10.0 91 1 1 0 5 0 1 0  GA8 201 B
4 1.54 2.34 19.7 0.77 0.21 9.8 83 1 1 0 6 1 1 0  GA8 201 B
5 1.69 2.49 19.9 0.58 0.15 11.8 86 1 2 0 5 1 1 0  GA8 201 B
6 1.54 2.33 22.8 0.25 -0.13 12.4 93 2 3 0 7 0 0 0  GA8 201 B
7 2.47 2.47 23.9 0.60 0.07 10.0 88 1 2 0 6 1 1 0  GA8 201 B

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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