PDBsum entry 6dpj Go to PDB code:  Tunnel analysis for: 6dpj calculated with MOLE 2.0 PDB id 6dpj Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   1 tunnel, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.26 1.65 18.9 -1.15 -0.32 9.6 64 2 0 0 1 2 1 0   2 1.19 3.25 15.3 0.37 0.75 15.7 76 2 0 0 4 1 0 0  IOD 204 A 3 1.17 3.20 17.7 0.51 0.71 12.9 76 2 0 0 4 1 0 0  IOD 204 A Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.