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PDBsum entry 6cto
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Pore analysis for: 6cto calculated with  MOLE 2.0
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PDB id
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6cto
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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3 pores,
coloured by radius |
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5 pores,
coloured by radius
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5 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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2.92 |
3.05 |
28.6 |
-2.46 |
-0.42 |
24.7 |
84 |
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4 |
4 |
1 |
1 |
1 |
0 |
0 |
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VT7 405 A DG 9 P DOC 10 P DC 5 T DA 6 T DG 7 T DC
8 T
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2 |
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1.28 |
1.54 |
43.9 |
-1.94 |
-0.50 |
23.8 |
84 |
6 |
7 |
2 |
1 |
2 |
0 |
0 |
NA 402 A VT7 405 A DC 8 P DG 9 P DOC 10 P DG 9 T
DC 10 T DA 11 T DT 12 T
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3 |
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1.29 |
1.54 |
47.4 |
-1.66 |
-0.44 |
21.9 |
87 |
6 |
5 |
3 |
2 |
2 |
0 |
0 |
NA 402 A VT7 405 A DC 8 P DG 9 P DOC 10 P DG 9 T
DC 10 T DA 11 T DT 12 T
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4 |
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2.69 |
2.81 |
53.0 |
-1.38 |
-0.31 |
18.2 |
90 |
4 |
2 |
2 |
4 |
1 |
0 |
0 |
VT7 405 A DG 9 P DOC 10 P DC 5 T DA 6 T DG 7 T DC
8 T
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5 |
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2.62 |
2.69 |
75.9 |
-1.11 |
-0.61 |
13.3 |
91 |
3 |
1 |
3 |
3 |
0 |
0 |
0 |
DT 6 P DG 7 P DC 5 T DG 7 T DC 8 T DA 11 T DT 12
T DC 13 T DA 14 T
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program