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PDBsum entry 6ctl

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Top Page protein dna_rna ligands metals tunnels links
Tunnel analysis for: 6ctl calculated with MOLE 2.0 PDB id
6ctl
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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2 tunnels, coloured by tunnel radius 2 tunnels, coloured by tunnel radius 2 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.17 1.17 23.5 -1.16 -0.35 20.1 76 1 1 0 2 1 1 0  DG 1 D DT 2 D DC 3 D DG 4 D DA 4 T DC 5 T
2 1.17 1.17 47.4 -0.77 -0.20 15.1 86 3 0 2 3 1 0 0  DG 1 D DT 2 D DT 6 P DG 7 P DC 5 T DA 6 T DG 7 T
DC 8 T

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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