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PDBsum entry 6c2c

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Top Page protein ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 6c2c calculated with MOLE 2.0 PDB id
6c2c
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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7 tunnels, coloured by tunnel radius 8 tunnels, coloured by tunnel radius 8 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.82 1.87 40.4 -0.44 -0.04 5.0 75 2 1 5 4 5 4 0  
2 1.45 4.19 40.3 -1.10 -0.03 13.0 76 3 3 3 3 5 4 0  
3 1.86 1.94 43.4 -0.36 0.04 4.1 70 1 0 4 5 7 4 0  
4 1.44 1.94 44.0 -0.91 -0.11 11.4 77 3 1 4 4 5 4 0  
5 1.49 1.49 43.9 -0.74 -0.07 9.5 75 3 2 4 4 7 4 0  
6 1.15 1.42 58.0 0.22 0.19 4.7 72 2 1 3 8 9 4 0  PEG 404 B
7 1.21 1.92 65.8 0.70 0.27 2.3 75 1 1 3 13 8 4 0  
8 1.58 1.69 16.8 -0.72 -0.55 13.7 92 1 1 3 2 0 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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