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PDBsum entry 6bwc

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Top Page protein ligands Protein-protein interface(s) tunnels links
Tunnel analysis for: 6bwc calculated with MOLE 2.0 PDB id
6bwc
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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1 tunnel, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.06 1.53 56.9 -0.84 -0.24 17.2 87 7 4 4 8 4 0 0  NAP 400 E UD1 401 E
2 1.21 1.54 99.6 -0.81 -0.10 14.9 81 9 4 8 6 11 0 0  NAP 400 E
3 1.20 1.54 101.8 -1.22 -0.40 15.8 92 10 2 15 11 4 1 0  NAP 400 D UD1 401 D NAP 400 E
4 1.24 3.34 105.7 -0.97 -0.17 16.6 81 11 5 8 6 10 1 0  NAP 400 E
5 1.23 3.25 109.5 -1.49 -0.29 20.1 86 11 7 8 7 8 0 0  NAP 400 C NAP 400 E

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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