PDBsum entry 6bpy Go to PDB code:  Pore analysis for: 6bpy calculated with MOLE 2.0 PDB id 6bpy Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   2 pores, coloured by radius 8 pores, coloured by radius 8 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.39 1.60 32.5 -0.19 -0.08 10.1 82 2 3 3 6 1 1 2  FAD 401 B 2 1.20 1.20 33.6 -0.43 -0.15 17.4 84 3 5 3 5 0 1 2  FAD 401 B 3 1.44 1.65 40.9 -0.73 -0.28 12.8 84 2 3 4 6 1 0 2  FAD 401 A 4 1.12 1.65 48.9 -0.44 -0.19 17.3 80 4 5 3 7 1 1 2  FAD 401 A MLI 403 A 5 1.94 1.93 61.8 -1.46 -0.46 19.7 81 7 4 4 4 2 1 0  MLI 403 A FMT 406 A MLT 410 B 6 1.88 1.95 72.4 -1.68 -0.52 22.9 85 7 6 3 6 1 0 0  MLI 403 A NAP 407 A 7 1.13 1.65 79.1 -1.00 -0.32 15.8 83 8 5 7 7 1 1 2  FAD 401 A MLI 403 A MLT 410 B 8 2.00 1.98 86.1 -1.53 -0.48 17.4 90 7 5 7 5 1 0 0  NAP 407 A MLT 410 B Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.