PDBsum entry 6b03

Pore analysis for: 6b03 calculated with

MOLE 2.0

PDB id

6b03

Pores calculated on whole structure

Pores calculated excluding ligands

View options

MOLEonline 2.0 manipulation
and
visualization
with HETATM:

without HETATM:

12 pores, coloured by radius

12 pores, coloured by radius

12 pores, coloured as in
list below

Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.

Pores

Free R

Length

HPathy

HPhob

Polar

Rel Mut

Residue..type

Ligands

Radius

1

1.85

2.00

39.8

-1.71

-0.41

19.7

79

3

2

1

4

0

1

0

2

2.67

3.13

44.5

-1.25

-0.45

20.8

90

4

5

5

4

0

1

0

3

2.45

2.54

48.7

-1.68

-0.64

18.9

82

2

8

8

5

1

1

0

4

1.62

3.04

54.9

-1.68

-0.40

19.1

84

6

5

5

3

4

0

0

5

2.01

3.07

59.4

-1.46

-0.23

15.6

74

3

3

3

4

3

5

0

6

1.64

2.86

64.4

-1.84

-0.65

19.9

91

6

7

10

3

1

1

0

7

1.62

2.98

70.5

-1.52

-0.54

17.4

91

5

6

8

4

1

0

0

8

3.59

3.66

85.4

-1.31

-0.46

16.2

87

6

8

7

5

3

0

0

9

1.25

1.29

95.5

-1.31

-0.16

22.8

82

9

7

3

7

5

0

0

10

1.29

1.46

101.4

-1.23

-0.20

21.0

79

10

7

3

8

6

0

0

11

1.20

1.47

118.7

-1.45

-0.36

21.7

85

10

11

7

8

4

1

0

12

1.28

1.46

124.8

-1.18

-0.27

20.2

85

9

10

5

9

4

0

0

Residue-type_colouring

Positive	Negative	Neutral	Aliphatic	Aromatic	Pro & Gly	Cysteine
H,K,R	D,E	S,T,N,Q	A,V,L,I,M	F,Y,W	P,G	C

Acknowledgement

Pores were calculated by

MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.