PDBsum entry 6a6a Go to PDB code:  Tunnel analysis for: 6a6a calculated with MOLE 2.0 PDB id 6a6a Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   2 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.72 2.48 17.8 -1.53 0.03 25.2 79 4 4 1 2 2 0 0  DAL 301 A ACT 304 A PGE 306 A PGE 307 A 2 1.47 1.75 19.2 -0.58 -0.20 11.5 85 2 1 2 2 1 0 0  DAL 301 A 3 1.78 2.47 23.9 -2.08 -0.27 30.5 77 5 6 2 2 3 0 0  DAL 301 A ACT 304 A PGE 306 A PGE 307 A PGE 306 B PGE 307 B 4 1.54 1.96 34.5 -1.91 -0.42 27.8 83 6 4 4 3 2 0 0  DAL 301 A ACT 304 A PGE 306 A PGE 307 A 5 1.33 1.33 15.5 -0.27 -0.08 8.7 81 2 2 0 2 1 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.