spacer
spacer

PDBsum entry 5za7

Go to PDB code: 
Top Page protein ligands tunnels links
Tunnel analysis for: 5za7 calculated with MOLE 2.0 PDB id
5za7
Tunnels calculated on whole structure Tunnels calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
0 tunnels, coloured by tunnel radius 2 tunnels, coloured by tunnel radius 2 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.34 1.34 15.3 -0.64 -0.77 6.7 82 0 1 2 0 0 0 1  HMX 301 U
2 1.35 1.35 21.3 -0.99 -0.78 9.1 96 2 2 3 0 0 0 0  HMX 301 U

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer