PDBsum entry 5yo1 Go to PDB code:  Pore analysis for: 5yo1 calculated with MOLE 2.0 PDB id 5yo1 Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   2 pores, coloured by radius 2 pores, coloured by radius 2 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.89 2.10 87.5 -1.07 -0.42 17.8 93 6 7 8 9 0 1 0   2 1.50 1.64 106.9 -1.18 -0.32 18.6 85 11 8 6 12 3 4 0  PUY 902 A PUY 903 A Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.