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PDBsum entry 5xim

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Top Page protein ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 5xim calculated with MOLE 2.0 PDB id
5xim
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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8 tunnels, coloured by tunnel radius 8 tunnels, coloured by tunnel radius 8 tunnels, coloured as in
list below
Tunnels
Length
Hydropathy
Hydrophobicity
Polarity
Mutability
Residue..type
Ligands
Radius
1 1.59 12.3 -2.50 -0.71 30.1 85 3 1 1 2 0 0 0  
2 1.59 12.9 -2.57 -0.75 30.8 84 3 2 1 2 0 0 0  
3 1.45 11.1 -1.80 -0.73 20.8 85 2 1 1 2 0 0 0  
4 1.39 5.9 0.39 0.00 11.7 87 1 1 0 3 0 0 0  
5 1.38 6.1 0.64 -0.01 8.8 87 1 1 0 3 0 0 0  
6 1.49 8.9 -1.07 -0.62 11.4 86 2 1 0 1 1 0 0  
7 1.71 8.5 -2.40 -0.37 32.6 68 1 3 0 0 2 0 0  
8 1.41 6.3 -1.52 -0.68 17.3 79 2 1 0 0 1 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.
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