PDBsum entry 5u8h Go to PDB code:  Pore analysis for: 5u8h calculated with MOLE 2.0 PDB id 5u8h Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   4 pores, coloured by radius 4 pores, coloured by radius 4 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 3.03 3.28 25.9 -2.33 -0.53 30.2 91 5 1 4 1 0 1 0  DA 6 T 2 3.03 3.28 37.3 -2.02 -0.55 27.0 89 6 1 2 3 0 0 0  DG 4 D DC 5 T DA 6 T 3 1.81 1.87 58.3 -1.01 -0.08 17.6 88 5 0 4 1 1 1 0  DC 2 P DT 6 P DG 7 P DC 8 P DG 9 P DC 10 P DA 11 T DT 12 T DC 13 T DA 14 T 4 1.89 1.89 63.5 -1.33 -0.24 21.2 89 4 1 4 2 0 1 0  DC 2 P DT 6 P DG 7 P DC 8 P DA 6 T DG 7 T DC 8 T DA 11 T DT 12 T DC 13 T DA 14 T Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.