PDBsum entry 5tyl Go to PDB code:  Tunnel analysis for: 5tyl calculated with MOLE 2.0 PDB id 5tyl Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.22 1.22 20.9 -2.13 -0.46 22.4 83 3 2 4 0 1 0 1   2 1.23 1.23 28.6 -2.52 -0.47 21.2 85 5 1 6 0 2 0 0   3 1.23 1.23 31.4 -1.39 -0.17 16.6 78 5 2 5 2 2 0 0   4 1.21 2.02 55.5 -1.87 -0.08 23.0 78 7 4 5 3 5 0 0   5 1.31 1.47 17.2 -0.74 -0.53 7.6 83 1 1 1 4 1 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.