PDBsum entry 5tyk Go to PDB code:  Pore analysis for: 5tyk calculated with MOLE 2.0 PDB id 5tyk Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   4 pores, coloured by radius 4 pores, coloured by radius 4 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.27 1.27 27.4 -0.16 -0.10 8.8 82 4 0 2 5 2 0 0   2 1.20 1.21 37.2 -1.62 0.13 19.2 78 5 2 2 3 4 0 0   3 1.38 2.02 187.5 -1.38 -0.28 16.7 82 8 2 6 6 1 0 0   4 1.20 1.30 201.7 -1.10 -0.09 16.9 81 8 4 6 8 4 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.