PDBsum entry 5tpa Go to PDB code:  Tunnel analysis for: 5tpa calculated with MOLE 2.0 PDB id 5tpa Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   8 tunnels, coloured by tunnel radius 8 tunnels, coloured by tunnel radius 8 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.77 1.81 23.7 -1.43 -0.23 17.7 78 4 3 1 2 2 2 0  7H2 302 A 2 1.48 1.48 26.6 -1.37 -0.44 13.3 89 3 1 6 2 0 2 0  7H2 302 A 3 1.45 3.09 28.0 -1.85 -0.56 20.2 84 5 4 4 2 0 2 0  7H2 302 A 4 1.58 1.58 29.0 -1.01 -0.34 13.8 77 4 3 0 3 2 2 0  7H2 302 A 5 1.67 2.43 34.4 -0.52 -0.05 12.3 79 3 3 2 5 1 2 0  7H2 302 A 6 1.97 2.14 34.5 -0.88 -0.19 13.7 78 3 4 2 4 2 2 0  7H2 302 A 7 1.61 1.92 34.7 -0.53 -0.02 16.8 76 5 2 0 6 2 2 0  7H2 302 A 8 1.50 1.80 41.0 -0.78 -0.28 13.8 86 4 4 3 5 1 2 0  GLU 301 A 7H2 302 A Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.