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PDBsum entry 5tpa

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protein ligands Protein-protein interface(s) links
Transport protein PDB id
5tpa

 

 

 

 

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Contents
Protein chains
275 a.a.
279 a.a.
Ligands
GLU
7H2
GLY
Waters ×147
PDB id:
5tpa
Name: Transport protein
Title: Structure of the human glun1/glun2a lbd in complex with compound 9 (gne3500)
Structure: Glutamate receptor ionotropic, nmda 2a. Chain: a. Fragment: ligand binding domain (unp residues 401-539, gt linker, unp residues 661-802). Synonym: glun2a, glutamate [nmda] receptor subunit epsilon-1, n- methyl d-aspartate receptor subtype 2a, hnr2a. Engineered: yes. Glutamate receptor ionotropic, nmda 1. Chain: b.
Source: Homo sapiens. Human. Organism_taxid: 9606. Gene: grin2a, nmdar2a. Expressed in: spodoptera frugiperda. Expression_system_taxid: 7108. Gene: grin1, nmdar1. Expression_system_taxid: 7108
Resolution:
2.48Å     R-factor:   0.190     R-free:   0.241
Authors: H.J.A.Wallweber,P.J.Lupardus
Key ref: E.Villemure et al. (2017). GluN2A-Selective Pyridopyrimidinone Series of NMDAR Positive Allosteric Modulators with an Improved in Vivo Profile. Acs Med Chem Lett, 8, 84-89. PubMed id: 28105280 DOI: 10.1021/acsmedchemlett.6b00388
Date:
20-Oct-16     Release date:   30-Nov-16    
PROCHECK
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 Headers
 References

Protein chain
Pfam   ArchSchema ?
Q12879  (NMDE1_HUMAN) -  Glutamate receptor ionotropic, NMDA 2A from Homo sapiens
Seq:
Struc:
 
Seq:
Struc:
 
Seq:
Struc:
1464 a.a.
275 a.a.
Protein chain
Pfam   ArchSchema ?
Q05586  (NMDZ1_HUMAN) -  Glutamate receptor ionotropic, NMDA 1 from Homo sapiens
Seq:
Struc:
 
Seq:
Struc:
938 a.a.
279 a.a.*
Key:    PfamA domain  Secondary structure  CATH domain
* PDB and UniProt seqs differ at 2 residue positions (black crosses)

 

 
DOI no: 10.1021/acsmedchemlett.6b00388 Acs Med Chem Lett 8:84-89 (2017)
PubMed id: 28105280  
 
 
GluN2A-Selective Pyridopyrimidinone Series of NMDAR Positive Allosteric Modulators with an Improved in Vivo Profile.
E.Villemure, M.Volgraf, Y.Jiang, G.Wu, C.Q.Ly, P.W.Yuen, A.Lu, X.Luo, M.Liu, S.Zhang, P.J.Lupardus, H.J.Wallweber, B.M.Liederer, G.Deshmukh, E.Plise, S.Tay, T.M.Wang, J.E.Hanson, D.H.Hackos, K.Scearce-Levie, J.B.Schwarz, B.D.Sellers.
 
  ABSTRACT  
 
No abstract given.

 

 

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