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PDBsum entry 5tku

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Hydrolase/hydrolase inhibitor PDB id
5tku
Contents
Protein chain
238 a.a.
Ligands
7DK
SO4 ×2
EDO ×10
Waters ×229

References listed in PDB file
Key reference
Title Structure-Based design of macrocyclic factor xia inhibitors: discovery of the macrocyclic amide linker.
Authors J.R.Corte, T.Fang, H.Osuna, D.J.Pinto, K.A.Rossi, J.E.Myers, S.Sheriff, Z.Lou, J.J.Zheng, T.W.Harper, J.M.Bozarth, Y.Wu, J.M.Luettgen, D.A.Seiffert, C.P.Decicco, R.R.Wexler, M.L.Quan.
Ref. J Med Chem, 2017, 60, 1060-1075. [DOI no: 10.1021/acs.jmedchem.6b01460]
PubMed id 28085275
Abstract
A novel series of macrocyclic FXIa inhibitors was designed based on our lead acyclic phenyl imidazole chemotype. Our initial macrocycles, which were double-digit nanomolar FXIa inhibitors, were further optimized with assistance from utilization of structure-based drug design and ligand bound X-ray crystal structures. This effort resulted in the discovery of a macrocyclic amide linker which was found to form a key hydrogen bond with the carbonyl of Leu41 in the FXIa active site, resulting in potent FXIa inhibitors. The macrocyclic FXIa series, exemplified by compound 16, had a FXIa Ki = 0.16 nM with potent anticoagulant activity in an in vitro clotting assay (aPTT EC1.5x = 0.27 μM) and excellent selectivity against the relevant blood coagulation enzymes.
Secondary reference #1
Title Tetrahydroquinoline derivatives as potent and selective factor xia inhibitors.
Authors M.L.Quan, P.C.Wong, C.Wang, F.Woerner, J.M.Smallheer, F.A.Barbera, J.M.Bozarth, R.L.Brown, M.R.Harpel, J.M.Luettgen, P.E.Morin, T.Peterson, V.Ramamurthy, A.R.Rendina, K.A.Rossi, C.A.Watson, A.Wei, G.Zhang, D.Seiffert, R.R.Wexler.
Ref. J Med Chem, 2014, 57, 955-969. [DOI no: 10.1021/jm401670x]
PubMed id 24405333
Abstract
Secondary reference #2
Title Phenylimidazoles as potent and selective inhibitors of coagulation factor xia with in vivo antithrombotic activity.
Authors J.J.Hangeland, T.J.Friends, K.A.Rossi, J.M.Smallheer, C.Wang, Z.Sun, J.R.Corte, T.Fang, P.C.Wong, A.R.Rendina, F.A.Barbera, J.M.Bozarth, J.M.Luettgen, C.A.Watson, G.Zhang, A.Wei, V.Ramamurthy, P.E.Morin, G.S.Bisacchi, S.Subramaniam, P.Arunachalam, A.Mathur, D.A.Seiffert, R.R.Wexler, M.L.Quan.
Ref. J Med Chem, 2014, 57, 9915-9932. [DOI no: 10.1021/jm5010607]
PubMed id 25405503
Abstract
Secondary reference #3
Title Pyridine and pyridinone-Based factor xia inhibitors.
Authors J.R.Corte, T.Fang, J.J.Hangeland, T.J.Friends, A.R.Rendina, J.M.Luettgen, J.M.Bozarth, F.A.Barbera, K.A.Rossi, A.Wei, V.Ramamurthy, P.E.Morin, D.A.Seiffert, R.R.Wexler, M.L.Quan.
Ref. Bioorg Med Chem Lett, 2015, 25, 925-930. [DOI no: 10.1016/j.bmcl.2014.12.050]
PubMed id 25592713
Abstract
Secondary reference #4
Title Structure-Based design of inhibitors of coagulation factor xia with novel p1 moieties.
Authors D.J.Pinto, J.M.Smallheer, J.R.Corte, E.J.Austin, C.Wang, T.Fang, L.M.Smith, K.A.Rossi, A.R.Rendina, J.M.Bozarth, G.Zhang, A.Wei, V.Ramamurthy, S.Sheriff, J.E.Myers, P.E.Morin, J.M.Luettgen, D.A.Seiffert, M.L.Quan, R.R.Wexler.
Ref. Bioorg Med Chem Lett, 2015, 25, 1635-1642. [DOI no: 10.1016/j.bmcl.2015.01.028]
PubMed id 25728130
Abstract
Secondary reference #5
Title Discovery of a potent parenterally administered factor xia inhibitor with hydroxyquinolin-2(1h)-One as the p2' Moiety.
Authors Z.Hu, P.C.Wong, P.J.Gilligan, W.Han, K.B.Pabbisetty, J.M.Bozarth, E.J.Crain, T.Harper, J.M.Luettgen, J.E.Myers, V.Ramamurthy, K.A.Rossi, S.Sheriff, C.A.Watson, A.Wei, J.J.Zheng, D.A.Seiffert, R.R.Wexler, M.L.Quan.
Ref. Acs Med Chem Lett, 2015, 6, 590-595. [DOI no: 10.1021/acsmedchemlett.5b00066]
PubMed id 26005539
Abstract
Secondary reference #6
Title Novel phenylalanine derived diamides as factor xia inhibitors
Authors L.M.Smith ii, M.J.Orwat, Z.Hu, W.Han, C.Wang, K.A.Rossi, P.J.Gilligan, K.B.Pabbisetty, H.Osuna, J.R.Corte, A.R.Renj.M.Luettgen, P.C.Wong, R.Narayanan, T.Harper, J.M.Bozarte.J.Crain, A.Wei, V.Ramamurthy, P.E.Morin, D.A.Seiffert, M.L.Quan, P.Y.S.Lam, R.R.Wexler, D.J.P.Pinto.
Ref. bioorg med chem lett, 2016, 26, 472.
Secondary reference #7
Title Orally bioavailable pyridine and pyrimidine-Based factor xia inhibitors: discovery of the methyl n-Phenyl carbamate p2 prime group.
Authors J.R.Corte, T.Fang, D.J.Pinto, M.J.Orwat, A.R.Rendina, J.M.Luettgen, K.A.Rossi, A.Wei, V.Ramamurthy, J.E.Myers, S.Sheriff, R.Narayanan, T.W.Harper, J.J.Zheng, Y.X.Li, D.A.Seiffert, R.R.Wexler, M.L.Quan.
Ref. Bioorg Med Chem Lett, 2016, 24, 2257-2272. [DOI no: 10.1016/j.bmc.2016.03.062]
PubMed id 27073051
Abstract
PROCHECK
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 Headers

 

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