PDBsum entry 5t5n Go to PDB code:  Pore analysis for: 5t5n calculated with MOLE 2.0 PDB id 5t5n Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   19 pores, coloured by radius 21 pores, coloured by radius 21 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.95 2.95 26.2 -1.72 -0.70 16.3 81 1 2 4 1 1 1 0   2 2.90 2.89 27.7 -2.09 -0.87 19.2 88 1 2 3 0 0 0 0   3 1.21 1.20 74.1 -0.84 -0.14 14.0 91 10 2 11 11 0 2 0   4 1.83 3.93 75.6 -1.04 -0.54 15.0 98 10 5 15 10 0 0 0   5 1.47 1.70 81.1 -1.06 -0.52 11.1 90 1 4 7 3 2 2 0   6 1.22 1.22 84.6 -1.08 -0.19 16.1 89 12 2 12 11 1 3 0   7 1.21 1.22 106.9 -1.16 -0.60 13.2 91 8 7 18 11 1 4 0   8 1.22 1.37 108.0 -0.85 -0.55 11.6 92 8 8 16 13 1 2 0   9 1.19 1.31 107.7 -1.29 -0.63 15.0 92 9 7 18 11 1 4 0   10 1.18 1.36 115.9 -1.18 -0.22 16.4 87 12 6 12 13 4 2 0   11 1.14 2.28 123.0 -1.02 -0.27 13.8 85 12 5 13 13 2 5 0   12 1.14 2.33 123.7 -0.86 -0.25 13.3 86 11 5 12 14 2 3 0   13 1.46 1.76 164.1 -1.80 -0.64 15.8 82 8 10 12 4 3 2 0   14 1.19 1.39 229.1 -1.46 -0.41 16.2 84 17 11 21 15 4 6 0   15 1.89 2.14 231.2 -1.95 -0.58 16.3 78 11 11 17 5 7 6 0   16 1.80 2.19 240.8 -1.96 -0.42 21.1 78 16 12 10 4 8 5 0   17 1.20 1.36 262.2 -1.54 -0.41 16.1 85 19 10 26 16 4 6 0   18 1.72 3.01 358.0 -2.04 -0.53 21.1 79 23 21 19 4 10 6 0   19 1.48 1.56 28.9 -1.04 -0.33 9.9 76 1 1 3 1 3 1 0   20 3.15 3.96 29.4 -2.08 -0.88 17.6 83 1 3 4 0 0 1 0   21 2.16 2.35 31.6 -1.59 -0.70 12.4 82 1 2 2 2 0 3 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.