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PDBsum entry 5t0i

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Pore analysis for: 5t0i calculated with MOLE 2.0 PDB id
5t0i
Pores calculated on whole structure Pores calculated excluding ligands

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30 pores, coloured by radius 30 pores, coloured by radius 30 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.43 2.31 109.5 -0.90 -0.10 20.7 78 9 11 3 15 5 1 1  
2 1.27 1.66 121.1 -0.16 0.06 18.7 80 6 12 4 18 6 0 2  
3 1.28 1.70 136.8 -0.75 -0.07 20.6 79 9 11 5 18 7 1 1  
4 2.28 3.88 152.2 -1.88 -0.24 26.1 77 13 14 5 9 6 1 1  
5 1.24 1.63 167.1 -1.86 -0.34 27.2 78 14 15 2 9 7 1 0  
6 1.27 1.94 168.2 -0.85 -0.12 14.7 81 15 6 13 16 5 0 0  
7 1.36 1.72 194.8 -1.59 -0.31 23.2 79 14 15 9 12 8 2 0  
8 1.21 2.50 199.2 -0.87 -0.20 18.1 78 12 12 13 19 3 2 0  
9 1.19 1.36 201.2 -0.99 -0.20 18.9 81 17 9 9 20 4 4 0  
10 1.29 1.48 201.3 -0.80 -0.05 18.1 81 15 12 14 21 10 1 0  
11 1.84 2.00 210.1 -2.04 -0.42 26.4 79 17 16 11 11 9 3 0  
12 1.57 2.07 211.5 -1.48 -0.22 22.7 81 21 13 14 15 7 2 0  
13 1.43 2.63 217.8 -0.83 -0.20 19.6 80 15 18 6 23 1 6 1  
14 1.41 2.50 226.4 -1.35 -0.27 21.1 82 14 16 10 16 5 1 0  
15 1.23 2.68 234.3 -0.96 -0.23 18.8 81 16 17 11 22 7 6 0  
16 1.33 1.64 258.5 -0.94 -0.14 20.9 81 18 19 11 25 10 1 1  
17 1.20 1.33 292.8 -1.60 -0.26 22.7 77 29 16 12 19 8 3 0  
18 1.20 1.24 298.5 -1.27 -0.20 20.1 77 27 17 13 25 7 6 1  
19 1.18 1.21 314.9 -1.32 -0.22 19.5 78 28 16 18 24 13 6 0  
20 1.31 1.89 316.8 -1.51 -0.29 23.0 79 18 25 13 19 8 5 0  
21 1.22 2.61 333.4 -1.08 -0.22 20.3 83 23 14 13 30 2 4 0  
22 1.41 2.78 345.8 -0.77 -0.15 17.4 78 27 17 12 37 12 7 1  
23 1.57 1.62 354.4 -1.29 -0.26 20.8 77 27 23 14 29 14 5 1  
24 1.32 1.35 365.4 -1.74 -0.38 22.6 80 25 27 20 16 11 6 1  
25 1.48 2.03 398.3 -0.78 -0.15 19.1 80 19 20 10 30 7 2 0  
26 1.23 1.21 389.5 -1.09 -0.27 18.4 81 24 28 20 27 9 9 1  
27 1.34 3.05 415.3 -1.60 -0.34 21.6 80 36 29 27 26 11 7 0  
28 1.49 1.58 468.4 -1.39 -0.31 21.8 81 32 24 22 32 4 1 0  
29 1.56 3.08 467.7 -1.17 -0.28 18.6 79 33 28 24 35 15 6 1  
30 1.33 1.33 603.7 -1.38 -0.27 20.0 80 40 32 30 39 13 9 1  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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