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PDBsum entry 5t0h

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Top Page protein ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 5t0h calculated with MOLE 2.0 PDB id
5t0h
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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5 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.24 1.24 34.6 -0.29 -0.13 17.4 83 4 2 0 7 0 0 0  
2 1.30 1.61 17.6 0.00 -0.07 15.7 77 2 1 1 5 0 0 0  
3 1.30 1.61 18.5 -0.16 -0.05 19.0 75 2 2 1 6 0 0 0  
4 1.22 1.76 26.8 0.92 0.14 9.4 92 2 2 2 8 0 1 0  
5 1.20 1.88 16.4 0.86 0.44 13.3 66 1 1 0 4 1 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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