PDBsum entry 5sy5 Go to PDB code:  Pore analysis for: 5sy5 calculated with MOLE 2.0 PDB id 5sy5 Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   6 pores, coloured by radius 6 pores, coloured by radius 6 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.69 1.90 31.6 -2.92 -0.69 36.9 85 3 4 3 1 0 1 0   2 1.69 1.88 75.8 -2.06 -0.60 27.9 91 7 5 6 3 0 0 0   3 2.22 3.60 80.4 -1.45 -0.57 21.1 89 8 6 6 6 1 2 0   4 2.28 3.16 82.0 -1.76 -0.54 22.8 90 7 5 6 4 1 1 0   5 1.18 2.69 127.3 -1.04 -0.37 16.8 86 9 6 11 13 1 4 0   6 1.19 2.05 37.2 -1.62 -0.55 16.3 93 5 1 6 1 1 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.