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PDBsum entry 5q0f

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Hydrolase/hydrolase inhibitor PDB id
5q0f
Contents
Protein chain
238 a.a.
Ligands
CYS-THR-THR-LYS-
ILE
9FA
SO4 ×2
EDO ×12
Waters ×193

References listed in PDB file
Key reference
Title Macrocyclic inhibitors of factor xia: discovery of alkyl-Substituted macrocyclic amide linkers with improved potency.
Authors J.R.Corte, W.Yang, T.Fang, Y.Wang, H.Osuna, A.Lai, W.R.Ewing, K.A.Rossi, J.E.Myers, S.Sheriff, Z.Lou, J.J.Zheng, T.W.Harper, J.M.Bozarth, Y.Wu, J.M.Luettgen, D.A.Seiffert, M.L.Quan, R.R.Wexler, P.Y.S.Lam.
Ref. Bioorg Med Chem Lett, 2017, 27, 3833-3839. [DOI no: 10.1016/j.bmcl.2017.06.058]
PubMed id 28687203
Abstract
Optimization of macrocyclic inhibitors of FXIa is described which focused on modifications to both the macrocyclic linker and the P1 group. Increases in potency were discovered through interactions with a key hydrophobic region near the S1 prime pocket by substitution of the macrocyclic linker with small alkyl groups. Both the position of substitution and the absolute stereochemistry of the alkyl groups on the macrocyclic linker which led to improved potency varied depending on the ring size of the macrocycle. Replacement of the chlorophenyltetrazole cinnamide P1 in these optimized macrocycles reduced the polar surface area and improved the oral bioavailability for the series, albeit at the cost of a decrease in potency.
Secondary reference #1
Title Tetrahydroquinoline derivatives as potent and selective factor xia inhibitors.
Authors M.L.Quan, P.C.Wong, C.Wang, F.Woerner, J.M.Smallheer, F.A.Barbera, J.M.Bozarth, R.L.Brown, M.R.Harpel, J.M.Luettgen, P.E.Morin, T.Peterson, V.Ramamurthy, A.R.Rendina, K.A.Rossi, C.A.Watson, A.Wei, G.Zhang, D.Seiffert, R.R.Wexler.
Ref. J Med Chem, 2014, 57, 955-969. [DOI no: 10.1021/jm401670x]
PubMed id 24405333
Abstract
Secondary reference #2
Title Phenylimidazoles as potent and selective inhibitors of coagulation factor xia with in vivo antithrombotic activity.
Authors J.J.Hangeland, T.J.Friends, K.A.Rossi, J.M.Smallheer, C.Wang, Z.Sun, J.R.Corte, T.Fang, P.C.Wong, A.R.Rendina, F.A.Barbera, J.M.Bozarth, J.M.Luettgen, C.A.Watson, G.Zhang, A.Wei, V.Ramamurthy, P.E.Morin, G.S.Bisacchi, S.Subramaniam, P.Arunachalam, A.Mathur, D.A.Seiffert, R.R.Wexler, M.L.Quan.
Ref. J Med Chem, 2014, 57, 9915-9932. [DOI no: 10.1021/jm5010607]
PubMed id 25405503
Abstract
Secondary reference #3
Title Pyridine and pyridinone-Based factor xia inhibitors.
Authors J.R.Corte, T.Fang, J.J.Hangeland, T.J.Friends, A.R.Rendina, J.M.Luettgen, J.M.Bozarth, F.A.Barbera, K.A.Rossi, A.Wei, V.Ramamurthy, P.E.Morin, D.A.Seiffert, R.R.Wexler, M.L.Quan.
Ref. Bioorg Med Chem Lett, 2015, 25, 925-930. [DOI no: 10.1016/j.bmcl.2014.12.050]
PubMed id 25592713
Abstract
Secondary reference #4
Title Structure-Based design of inhibitors of coagulation factor xia with novel p1 moieties.
Authors D.J.Pinto, J.M.Smallheer, J.R.Corte, E.J.Austin, C.Wang, T.Fang, L.M.Smith, K.A.Rossi, A.R.Rendina, J.M.Bozarth, G.Zhang, A.Wei, V.Ramamurthy, S.Sheriff, J.E.Myers, P.E.Morin, J.M.Luettgen, D.A.Seiffert, M.L.Quan, R.R.Wexler.
Ref. Bioorg Med Chem Lett, 2015, 25, 1635-1642. [DOI no: 10.1016/j.bmcl.2015.01.028]
PubMed id 25728130
Abstract
Secondary reference #5
Title Discovery of a potent parenterally administered factor xia inhibitor with hydroxyquinolin-2(1h)-One as the p2' Moiety.
Authors Z.Hu, P.C.Wong, P.J.Gilligan, W.Han, K.B.Pabbisetty, J.M.Bozarth, E.J.Crain, T.Harper, J.M.Luettgen, J.E.Myers, V.Ramamurthy, K.A.Rossi, S.Sheriff, C.A.Watson, A.Wei, J.J.Zheng, D.A.Seiffert, R.R.Wexler, M.L.Quan.
Ref. Acs Med Chem Lett, 2015, 6, 590-595. [DOI no: 10.1021/acsmedchemlett.5b00066]
PubMed id 26005539
Abstract
Secondary reference #6
Title Novel phenylalanine derived diamides as factor xia inhibitors.
Authors L.M.Smith, M.J.Orwat, Z.Hu, W.Han, C.Wang, K.A.Rossi, P.J.Gilligan, K.B.Pabbisetty, H.Osuna, J.R.Corte, A.R.Rendina, J.M.Luettgen, P.C.Wong, R.Narayanan, T.W.Harper, J.M.Bozarth, E.J.Crain, A.Wei, V.Ramamurthy, P.E.Morin, B.Xin, J.Zheng, D.A.Seiffert, M.L.Quan, P.Y.Lam, R.R.Wexler, D.J.Pinto.
Ref. Bioorg Med Chem Lett, 2016, 26, 472-478. [DOI no: 10.1016/j.bmcl.2015.11.089]
PubMed id 26704266
Abstract
Secondary reference #7
Title Orally bioavailable pyridine and pyrimidine-Based factor xia inhibitors: discovery of the methyl n-Phenyl carbamate p2 prime group.
Authors J.R.Corte, T.Fang, D.J.Pinto, M.J.Orwat, A.R.Rendina, J.M.Luettgen, K.A.Rossi, A.Wei, V.Ramamurthy, J.E.Myers, S.Sheriff, R.Narayanan, T.W.Harper, J.J.Zheng, Y.X.Li, D.A.Seiffert, R.R.Wexler, M.L.Quan.
Ref. Bioorg Med Chem Lett, 2016, 24, 2257-2272. [DOI no: 10.1016/j.bmc.2016.03.062]
PubMed id 27073051
Abstract
Secondary reference #8
Title Structure-Based design of macrocyclic factor xia inhibitors: discovery of the macrocyclic amide linker.
Authors J.R.Corte, T.Fang, H.Osuna, D.J.Pinto, K.A.Rossi, J.E.Myers, S.Sheriff, Z.Lou, J.J.Zheng, T.W.Harper, J.M.Bozarth, Y.Wu, J.M.Luettgen, D.A.Seiffert, C.P.Decicco, R.R.Wexler, M.L.Quan.
Ref. J Med Chem, 2017, 60, 1060-1075. [DOI no: 10.1021/acs.jmedchem.6b01460]
PubMed id 28085275
Abstract
PROCHECK
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 Headers

 

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