PDBsum entry 5q0e Go to PDB code:  Tunnel analysis for: 5q0e calculated with MOLE 2.0 PDB id 5q0e Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   0 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.60 1.78 16.4 -0.87 -0.47 10.1 74 2 2 0 1 2 0 0  9FD 301 A EDO 304 A EDO 307 A EDO 308 A EDO 316 A 2 1.28 1.28 21.4 -1.30 -0.65 15.9 68 2 3 0 0 2 0 0  9FD 301 A EDO 304 A EDO 307 A EDO 308 A EDO 316 A 3 1.29 1.29 17.2 -0.34 -0.47 8.1 79 2 2 0 2 2 1 0  EDO 311 A 4 1.42 1.42 15.1 -0.38 -0.37 6.2 86 1 0 1 2 2 0 0  EDO 309 A EDO 313 A Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.