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PDBsum entry 5p21

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Cleft analysis for: 5p21 PDB id
5p21
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Binding-site(s)
Binding-surface(s)
Coloured by
 cleft (as in table below)
 closest atom type
 residue type
 residue conservation
Clefts
R1
ratio
Accessible
vertices
Buried
vertices
Average
depth
Residue..type
Ligands
Volume
1 2729.11 4.61 68.91 1 13.34 1 11.77 1 7 11 10 11 4 5 0 GNP 167[A] (32 atoms)
2 591.47 0.00 62.56 3 6.93 4 7.04 4 4 4 2 3 1 3 0  
3 526.50 0.00 61.40 4 9.20 2 8.03 2 2 3 3 5 2 0 0  
4 414.28 0.00 59.81 6 2.62 9 5.21 10 3 3 3 2 1 2 0  
5 282.66 0.00 64.59 2 3.50 7 6.02 5 2 1 1 5 1 0 0  
6 207.98 0.00 53.16 7 7.25 3 5.94 6 2 2 1 1 0 0 0  
7 191.53 0.00 51.70 8 2.65 8 5.61 8 1 1 1 2 0 2 0  
8 163.27 0.00 49.12 10 1.98 10 5.79 7 2 1 2 0 0 0 0  
9 158.20 0.00 60.28 5 5.37 5 7.44 3 1 1 1 2 1 0 0  
10 130.78 0.00 49.75 9 5.05 6 5.56 9 1 1 2 0 1 0 0  
 Protein structure

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C
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