PDBsum entry 5ogc Go to PDB code:  Pore analysis for: 5ogc calculated with MOLE 2.0 PDB id 5ogc Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   4 pores, coloured by radius 6 pores, coloured by radius 6 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.30 1.54 34.7 -3.04 -0.58 35.8 85 5 7 3 0 2 0 0   2 1.26 1.52 36.0 -2.10 -0.50 28.9 86 4 7 3 2 2 0 0   3 1.16 1.74 38.0 -1.46 -0.46 12.3 84 1 2 7 3 1 2 1  GDP 600 B 4 1.19 1.37 42.6 -2.73 -0.55 35.3 83 6 8 2 3 2 0 0   5 1.71 1.84 119.8 -2.51 -0.61 31.4 85 11 12 8 4 2 0 0   6 1.23 1.22 125.5 0.20 0.09 10.7 87 8 1 4 23 4 0 0  9V5 401 K Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.