PDBsum entry 5o6t Go to PDB code:  Tunnel analysis for: 5o6t calculated with MOLE 2.0 PDB id 5o6t Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   8 tunnels, coloured by tunnel radius 8 tunnels, coloured by tunnel radius 8 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.67 1.78 22.3 -1.24 -0.50 17.6 77 2 2 4 1 3 0 0   2 1.67 1.78 23.2 -0.65 -0.34 15.3 69 2 3 1 2 3 0 0   3 1.69 1.78 24.1 -1.16 -0.45 17.3 75 2 2 4 1 3 1 0   4 1.67 1.79 25.0 -0.48 -0.28 13.9 68 2 3 1 2 3 1 0   5 1.65 1.65 18.1 -0.64 -0.35 14.6 74 1 2 4 1 3 0 0   6 1.67 1.67 19.6 -0.27 -0.21 12.1 73 1 2 4 1 3 1 0   7 1.66 1.65 24.2 -0.41 -0.34 12.6 72 1 3 1 2 3 0 0   8 1.67 1.66 25.8 -0.12 -0.21 10.8 71 1 3 1 2 3 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.