spacer
spacer

PDBsum entry 5o2l

Go to PDB code: 
Top Page protein ligands metals pores links
Pore analysis for: 5o2l calculated with MOLE 2.0 PDB id
5o2l
Pores calculated on whole structure Pores calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
2 pores, coloured by radius 4 pores, coloured by radius 4 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.54 2.70 44.0 -0.73 -0.08 18.2 76 4 4 3 5 2 1 0  ADP 801 A GOL 806 A
2 1.71 1.96 49.5 -1.30 -0.47 17.0 85 5 5 6 5 2 0 0  ADP 801 A MG 802 A BEF 803 A
3 2.02 2.15 85.8 -1.49 -0.45 22.7 81 8 7 3 6 1 1 0  
4 2.88 3.17 95.9 -0.82 -0.27 14.8 85 4 9 7 9 3 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer