spacer
spacer

PDBsum entry 5o2b

Go to PDB code: 
Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 5o2b calculated with MOLE 2.0 PDB id
5o2b
Pores calculated on whole structure Pores calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
3 pores, coloured by radius 4 pores, coloured by radius 4 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.24 2.29 28.7 -0.89 -0.55 14.1 75 0 2 1 3 4 0 0  
2 1.24 1.24 37.3 0.40 -0.10 7.7 82 2 2 1 7 2 0 0  KS1 501 B
3 1.74 1.74 76.2 -0.44 -0.10 10.2 77 1 5 1 7 7 0 0  
4 1.23 1.27 138.9 -0.26 -0.16 10.8 80 4 4 2 5 3 2 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer