 |
PDBsum entry 5o1v
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Pore analysis for: 5o1v calculated with  MOLE 2.0
|
PDB id
|
|
|
|
5o1v
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Pores calculated on whole structure |
|
Pores calculated excluding ligands
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
2 pores,
coloured by radius |
|
4 pores,
coloured by radius
|
4 pores,
coloured as in
list below
|
|
|
|
|
|
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
|
|
|
|
|
|
|
Free R
|
|
|
|
|
|
|
Length
|
|
|
|
|
|
|
HPathy
|
|
|
|
|
|
|
HPhob
|
|
|
|
|
|
|
Polar
|
|
|
|
|
|
|
Rel Mut
|
|
|
|
|
|
|
Residue..type
|
|
|
|
|
|
|
Ligands
|
|
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.49 |
1.53 |
31.1 |
0.91 |
0.07 |
6.3 |
77 |
|
1 |
1 |
0 |
6 |
2 |
0 |
1 |
|
EDO 501 A EDO 502 A EDO 504 A
|
 |
|
2 |
 |
1.17 |
1.17 |
32.2 |
0.35 |
-0.13 |
8.0 |
78 |
2 |
1 |
1 |
6 |
2 |
0 |
1 |
EDO 501 A EDO 502 A EDO 504 A
|
|
3 |
 |
2.09 |
2.95 |
49.0 |
-1.24 |
-0.23 |
14.6 |
79 |
7 |
2 |
1 |
3 |
4 |
1 |
0 |
SEP 304 B
|
 |
4 |
 |
2.09 |
2.98 |
52.5 |
-1.51 |
-0.44 |
17.0 |
82 |
5 |
2 |
1 |
3 |
3 |
1 |
0 |
SEP 304 B
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
 |
Residue-type_colouring |
 |
|
|
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
|
MOLE 2.0 program